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Searching for up to 100 curated homologs for RR42_RS18505 FitnessBrowser__Cup4G11:RR42_RS18505 (401 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Q3S559 lysine 6-dehydrogenase (EC 1.4.1.18) from Achromobacter denitrificans (see paper)
    60% identity, 92% coverage of query (400 bits)

Q5LX24 lysine 6-dehydrogenase (EC 1.4.1.18) from Ruegeria pomeroyi (see paper)
    52% identity, 90% coverage of query (330 bits)

lysDH / Q9AJC6 L-lysine 6-dehydrogenase subunit (EC 1.4.1.18) from Geobacillus stearothermophilus (see paper)
LYSDH_GEOSE / Q9AJC6 Lysine 6-dehydrogenase; L-lysine 6-dehydrogenase; L-lysine epsilon-dehydrogenase; EC 1.4.1.18 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see paper)
Q9AJC6 lysine 6-dehydrogenase (EC 1.4.1.18) from Geobacillus stearothermophilus (see 2 papers)
    30% identity, 89% coverage of query (122 bits)

Build an alignment

Build an alignment for RR42_RS18505 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory