Searching for up to 100 curated homologs for RR42_RS20080 FitnessBrowser__Cup4G11:RR42_RS20080 (458 a.a.)

Found high-coverage hits (≥70%) to 14 curated proteins.

Removed hits that are identical to the query, leaving 13

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

BPHYT_RS19340 L-serine ammonia-lyase (EC 4.3.1.17) from Burkholderia phytofirmans PsJN
    78% identity, 100% coverage of query (742 bits)

Pf6N2E2_5557 L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens FW300-N2E2
    68% identity, 100% coverage of query (636 bits)

Ac3H11_929 L-serine ammonia-lyase (EC 4.3.1.17) from Acidovorax sp. GW101-3H11
    66% identity, 100% coverage of query (608 bits)

Pf1N1B4_1013 L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens FW300-N1B4
    60% identity, 100% coverage of query (521 bits)

PfGW456L13_4954 L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens GW456-L13
    60% identity, 100% coverage of query (518 bits)

AO353_15500 L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens FW300-N2E3
    59% identity, 100% coverage of query (515 bits)

Q5ZXE1 L-serine ammonia-lyase (EC 4.3.1.17) from Legionella pneumophila (see 4 papers)
    54% identity, 100% coverage of query (498 bits)

4rqoB Crystal structure of l-serine dehydratase from legionella pneumophila (see paper)
    54% identity, 100% coverage of query (488 bits)

SdaA / b1814 L-serine deaminase I (EC 4.3.1.17) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
sdaA / P16095 L-serine deaminase I (EC 4.3.1.17) from Escherichia coli (strain K12) (see 4 papers)
P16095 L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli (see paper)
    54% identity, 100% coverage of query (471 bits)

YhaQ / b4471 L-serine deaminase III (EC 4.3.1.17) from Escherichia coli K-12 substr. MG1655 (see paper)
tdcG / P42630 L-serine deaminase III (EC 4.3.1.17) from Escherichia coli (strain K12) (see 4 papers)
P42630 L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli (see paper)
    54% identity, 99% coverage of query (458 bits)

SdaB / b2797 L-serine deaminase II (EC 4.3.1.17) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
sdaB / P30744 L-serine deaminase II (EC 4.3.1.17) from Escherichia coli (strain K12) (see 2 papers)
SDHM_ECOLI / P30744 L-serine dehydratase 2; SDH 2; L-serine deaminase 2; L-SD2; EC 4.3.1.17 from Escherichia coli (strain K12) (see paper)
P30744 L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli (see paper)
sdaB / GB|AAC75839.1 L-serine dehydratase 2; EC 4.3.1.17 from Escherichia coli K12 (see 3 papers)
    52% identity, 100% coverage of query (451 bits)

sdaA / Q8NQ09 L-serine dehydratase (EC 4.3.1.17) from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) (see paper)
sdaA / RF|YP_225930.1 L-serine ammonia-lyase; EC 4.3.1.17 from Corynebacterium glutamicum ATCC 13032 (see paper)
    49% identity, 100% coverage of query (390 bits)

DvMF_0011 L-serine ammonia-lyase (EC 4.3.1.17) from Desulfovibrio vulgaris Miyazaki F
    45% identity, 99% coverage of query (275 bits)

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Build an alignment for RR42_RS20080 and 13 homologs with ≥ 30% identity

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