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Searching for up to 100 curated homologs for RR42_RS23750 FitnessBrowser__Cup4G11:RR42_RS23750 (560 a.a.)

Found high-coverage hits (≥70%) to 8 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

H281DRAFT_05724 3-oxo-5,6-didehydrosuberyl-CoA semialdehyde dehydrogenase PaaZ (EC:1.2.1.91) from Paraburkholderia bryophila 376MFSha3.1
    75% identity, 99% coverage of query (821 bits)

BPHYT_RS17340 3-oxo-5,6-didehydrosuberyl-CoA semialdehyde dehydrogenase PaaZ (EC:1.2.1.91) from Burkholderia phytofirmans PsJN
    75% identity, 99% coverage of query (793 bits)

Build an alignment

Build an alignment for RR42_RS23750 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

3hazA / Q89E26 Crystal structure of bifunctional proline utilization a (puta) protein (see paper)
    24% identity, 73% coverage of query (69.3 bits)

ROCA2_BACSU / P94391 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis (strain 168) (see 3 papers)
    24% identity, 79% coverage of query (68.9 bits)

6bsnA Structure of proline utilization a (puta) with proline bound in remote sites
    24% identity, 73% coverage of query (65.1 bits)

Q65NN2 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis (see paper)
    23% identity, 79% coverage of query (63.9 bits)

AL9A1_ORYLA / Q19A30 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABADH; Aldehyde dehydrogenase family 9 member A1; EC 1.2.1.47; EC 1.2.1.3 from Oryzias latipes (Japanese rice fish) (Japanese killifish) (see paper)
    24% identity, 71% coverage of query (60.1 bits)

3ty7B / Q99SD6 Crystal structure of aldehyde dehydrogenase family protein from staphylococcus aureus
    24% identity, 76% coverage of query (58.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory