Searching for up to 100 curated homologs for RR42_RS24425 (71 a.a.)

Found high-coverage hits (≥70%) to 27 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PsrA / VIMSS583573 PsrA regulator of Fatty acid degradation, effector Oleate (repressor) from Dechloromonas aromatica RCB
    39% identity, 94% coverage of query (52.8 bits)

RutR / VIMSS7086436 RutR regulator of Pyrimidine utilization, effector Uracil (activator/repressor) from Burkholderia phymatum STM815
    41% identity, 83% coverage of query (51.6 bits)

DVU0057 / VIMSS8505916 DVU0057 from Desulfovibrio salexigens DSM 2638
    37% identity, 92% coverage of query (50.1 bits)

PsrA / VIMSS2702720 PsrA regulator of Fatty acid degradation, effector Oleate (repressor) from Idiomarina baltica OS145
    45% identity, 75% coverage of query (49.7 bits)

PsrA / VIMSS839393 PsrA regulator of Fatty acid degradation, effector Oleate (repressor) from Colwellia psychrerythraea 34H
    40% identity, 85% coverage of query (48.9 bits)

PsrA / VIMSS572739 PsrA regulator of Fatty acid degradation, effector Oleate (repressor) from Rhodopseudomonas palustris CGA009
    42% identity, 90% coverage of query (48.5 bits)

PsrA / VIMSS862841 PsrA regulator of Fatty acid degradation, effector Oleate (repressor) from Idiomarina loihiensis L2TR
    46% identity, 70% coverage of query (48.1 bits)

DVU0436 / VIMSS209372 DVU0436 from Desulfovibrio vulgaris Hildenborough
    35% identity, 92% coverage of query (48.1 bits)

RutR / VIMSS908916 RutR regulator of Pyrimidine utilization, effector Uracil (repressor) from Silicibacter pomeroyi DSS-3
    42% identity, 80% coverage of query (47.0 bits)

PsrA / VIMSS3565141 PsrA regulator of Fatty acid degradation, effector Oleate (repressor) from Aeromonas salmonicida subsp. salmonicida A449
    40% identity, 89% coverage of query (47.0 bits)

PsrA / VIMSS736161 PsrA regulator of Fatty acid degradation, effector Oleate (repressor) from Burkholderia mallei ATCC 23344
    38% identity, 90% coverage of query (46.6 bits)

DVU0057 / VIMSS8501435 DVU0057 from Desulfovibrio vulgaris str. Miyazaki F
    39% identity, 79% coverage of query (46.6 bits)

RutR / VIMSS1776949 RutR regulator of Pyrimidine utilization, effector Uracil (activator/repressor) from Ralstonia metallidurans CH34
    46% identity, 70% coverage of query (46.2 bits)

AcrR / VIMSS551346 AcrR regulator of Multidrug resistance, effector Rhodamine 6G; Ethidium bromide; Proflavin (repressor) from Photorhabdus luminescens TTO1
    38% identity, 87% coverage of query (45.4 bits)

PsrA / VIMSS7086604 PsrA regulator of Fatty acid degradation, effector Oleate (repressor) from Burkholderia phymatum STM815
    38% identity, 96% coverage of query (45.4 bits)

PsrA / VIMSS6896230 PsrA regulator of Fatty acid degradation, effector Oleate (repressor) from Alteromonas macleodii 'Deep ecotype'
    37% identity, 94% coverage of query (45.1 bits)

FASR_MYCS2 / A0QTR3 HTH-type transcriptional activator FasR; Fatty acid synthesis regulator from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
    37% identity, 83% coverage of query (45.1 bits)

RAAS_MYCTU / O86312 HTH-type transcriptional regulatory protein RaaS; Regulator of antimicrobial-assisted survival from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 3 papers)
    40% identity, 87% coverage of query (45.1 bits)

2uxoB Ttgr in complex with tetracycline
    42% identity, 80% coverage of query (44.3 bits)

2uxuA Ttgr in complex with naringenin
    42% identity, 80% coverage of query (44.3 bits)

2uxpA Ttgr in complex chloramphenicol
    42% identity, 80% coverage of query (44.3 bits)

2uxiA Phloretin in complex with ttgr
    42% identity, 80% coverage of query (44.3 bits)

2uxhA Ttgr in complex with quercetin
    42% identity, 80% coverage of query (44.3 bits)

7k1cB / Q9AIU0 Ttgr in complex with resveratrol (see paper)
    42% identity, 80% coverage of query (44.3 bits)

RutR / VIMSS6896853 RutR regulator of Pyrimidine utilization, effector Uracil (repressor) from Alteromonas macleodii 'Deep ecotype'
    40% identity, 73% coverage of query (43.9 bits)

8v90A Ttgr variant 3a7 with naltrexone
    42% identity, 80% coverage of query (43.9 bits)

6srnA / Q9JN89 Structural basis for control of antibiotic production by bacterial hormones (see paper)
    43% identity, 75% coverage of query (43.5 bits)

Build an alignment

Build an alignment for RR42_RS24425 and 27 homologs with ≥ 30% identity

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