Searching for up to 100 curated homologs for RR42_RS26440 FitnessBrowser__Cup4G11:RR42_RS26440 (352 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PGA1_c12650 D-lactate transporter, permease component 1 from Phaeobacter inhibens BS107
    35% identity, 82% coverage of query (161 bits)

TC 3.A.1.4.7 / Q92TN2 ABC transporter, permease, component of The protocatechuate (3,4-dihydroxybenzoate) uptake porter, PcaMNVWX from Rhizobium meliloti (strain 1021)
    31% identity, 85% coverage of query (111 bits)

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Build an alignment for RR42_RS26440 and 2 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

braE / CAB75550.1 integral membrane protein from Rhizobium leguminosarum bv. viciae (see 2 papers)
    27% identity, 85% coverage of query (88.2 bits)

TC 3.A.1.4.11 / Q6N8W1 Putative branched-chain amino acid transport system ATP-binding protein, component of The phenylpropeneoid uptake porter, CouPSTW from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
    30% identity, 75% coverage of query (88.2 bits)

HSERO_RS00890 L-proline ABC transporter, permease component 2 from Herbaspirillum seropedicae SmR1
    26% identity, 90% coverage of query (82.8 bits)

TC 3.A.1.4.5 / Q8NRV9 UrtC, component of The high affinity urea/thiourea/hydroxyurea porter from Corynebacterium glutamicum (see paper)
    29% identity, 71% coverage of query (63.5 bits)

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