Sites on a Tree

 

Searching for up to 100 curated homologs for RR42_RS28585 FitnessBrowser__Cup4G11:RR42_RS28585 (251 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AIS_PSESP / A0A0A1H8I4 Aconitate isomerase; AI; EC 5.3.3.7 from Pseudomonas sp. (see paper)
A0A0A1H8I4 aconitate DELTA-isomerase (EC 5.3.3.7) from Pseudomonas sp. WU-0701 (see paper)
    51% identity, 91% coverage of query (229 bits)

proX / BAB21454.2 ProX protein from Pseudomonas straminea (see 2 papers)
    37% identity, 74% coverage of query (115 bits)

Build an alignment

Build an alignment for RR42_RS28585 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory