Searching for up to 100 curated homologs for RR42_RS34985 FitnessBrowser__Cup4G11:RR42_RS34985 (368 a.a.)
Found high-coverage hits (≥70%) to 100 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
SM_b21107 dehydratase involved in L-fucose catabolism from Sinorhizobium meliloti 1021
62% identity, 98% coverage of query (463 bits)
2pp1A / Q8ZL58 Crystal structure of l-talarate/galactarate dehydratase from salmonella typhimurium lt2 liganded with mg and l-lyxarohydroxamate (see paper)
38% identity, 93% coverage of query (231 bits)
TAGAD_SALTY / Q8ZL58 L-talarate/galactarate dehydratase; TalrD/GalrD; StTGD; EC 4.2.1.156; EC 4.2.1.42 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
Q8ZL58 L-talarate dehydratase (EC 4.2.1.156); galactarate dehydratase (EC 4.2.1.42) from Salmonella enterica subsp. enterica serovar Typhimurium (see 2 papers)
38% identity, 93% coverage of query (231 bits)
2pp3A Crystal structure of l-talarate/galactarate dehydratase mutant k197a liganded with mg and l-glucarate
38% identity, 93% coverage of query (228 bits)
aci / H2IFX0 3,6-anhydro-L-galactonate cycloisomerase (EC 5.5.1.25) from Vibrio sp. (strain EJY3) (see paper)
ACI_VIBSJ / H2IFX0 3,6-anhydro-alpha-L-galactonate cycloisomerase; AHGA cycloisomerase; EC 5.5.1.25 from Vibrio sp. (strain EJY3) (see paper)
H2IFX0 3,6-anhydro-L-galactonate cycloisomerase (EC 5.5.1.25) from Vibrio sp. (see paper)
36% identity, 98% coverage of query (221 bits)
5xd8B / H2IFX0 Crystal structure analysis of 3,6-anhydro-l-galactonate cycloisomerase (see paper)
36% identity, 98% coverage of query (221 bits)
3cb3A / Q12GE3 Crystal structure of l-talarate dehydratase from polaromonas sp. Js666 complexed with mg and l-glucarate
38% identity, 95% coverage of query (221 bits)
2og9A Crystal structure of mandelate racemase/muconate lactonizing enzyme from polaromonas sp. Js666
39% identity, 86% coverage of query (217 bits)
3ck5A / Q9RKF7 Crystal structure of a racemase from streptomyces coelicolor a3(2) with bound magnesium
38% identity, 97% coverage of query (213 bits)
ACI_STRCO / Q9RKF7 3,6-anhydro-alpha-L-galactonate cycloisomerase; AHGA cycloisomerase; EC 5.5.1.25 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see paper)
38% identity, 97% coverage of query (211 bits)
4h19A / Q7CU39 Crystal structure of an enolase (mandelate racemase subgroup, target efi-502087) from agrobacterium tumefaciens, with bound mg and d- ribonohydroxamate, ordered loop
36% identity, 94% coverage of query (192 bits)
araD / Q97U96 D-arabinonate dehydratase subunit (EC 4.2.1.5) from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (see paper)
ARAD_SACS2 / Q97U96 Arabinonate dehydratase; EC 4.2.1.5 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see paper)
Q97U96 Arabinonate dehydratase (EC 4.2.1.5) from Saccharolobus solfataricus (see paper)
33% identity, 89% coverage of query (176 bits)
3op2A Crystal structure of putative mandelate racemase from bordetella bronchiseptica rb50 complexed with 2-oxoglutarate/phosphate
35% identity, 96% coverage of query (167 bits)
3ozmA / A0A0H3LT39 Crystal structure of enolase superfamily member from bordetella bronchiseptica complexed with mg, m-xylarate and l-lyxarate
34% identity, 96% coverage of query (166 bits)
3ozmD Crystal structure of enolase superfamily member from bordetella bronchiseptica complexed with mg, m-xylarate and l-lyxarate
34% identity, 96% coverage of query (166 bits)
mdlA / P11444 mandelate racemase (EC 5.1.2.2) from Pseudomonas putida (see paper)
MANR_PSEPU / P11444 Mandelate racemase; MR; EC 5.1.2.2 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 4 papers)
R9RJF1 mandelate racemase (EC 5.1.2.2) from Pseudomonas aeruginosa (see paper)
30% identity, 95% coverage of query (160 bits)
7mqxE / P11444 P. Putida mandelate racemase forms an oxobenzoxaborole adduct with 2- formylphenylboronic acid (see paper)
30% identity, 95% coverage of query (160 bits)
6vimA P. Putida mandelate racemase co-crystallized with phenylboronic acid
30% identity, 95% coverage of query (160 bits)
4x2pA P. Putida mandelate racemase in complex with 3-hydroxypyruvate
30% identity, 95% coverage of query (160 bits)
4m6uA P. Putida mandelate racemase co-crystallized with tartronic acid
30% identity, 95% coverage of query (160 bits)
4fp1A P. Putida mandelate racemase co-crystallized with 3,3,3-trifluoro-2- hydroxy-2-(trifluoromethyl) propionic acid
30% identity, 95% coverage of query (160 bits)
3uxlA P. Putida mandelate racemase co-crystallized with the intermediate analogue cupferron
30% identity, 95% coverage of query (160 bits)
3uxkA P. Putida mandelate racemase co-crystallized with the intermediate analogue benzohydroxamate
30% identity, 95% coverage of query (160 bits)
2mnrA Mechanism of the reaction catalyzed by mandelate racemase. 2. Crystal structure of mandelate racemase at 2.5 angstroms resolution: identification of the active site and possible catalytic residues
30% identity, 95% coverage of query (160 bits)
1dtnA Mandelate racemase mutant d270n co-crystallized with (s)-atrolactate
30% identity, 95% coverage of query (159 bits)
1mdlA Mandelate racemase mutant k166r co-crystallized with (r)-mandelate
30% identity, 95% coverage of query (159 bits)
3ugvF / A8TYI5 Crystal structure of an enolase from alpha pretobacterium bal199 (efi target efi-501650) with bound mg
30% identity, 87% coverage of query (158 bits)
3bjsB / Q120Q7 Crystal structure of a member of enolase superfamily from polaromonas sp. Js666
30% identity, 93% coverage of query (152 bits)
4hncA P. Putida c92s/k166c/c264s mandelate racemase co-crystallized with benzilic acid
30% identity, 95% coverage of query (152 bits)
3rcyF Crystal structure of mandelate racemase/muconate lactonizing enzyme- like protein from roseovarius sp. Tm1035
31% identity, 87% coverage of query (149 bits)
5olcC / G0L7B8 Crystal structure of the 3,6-anhydro-d-galactonate cycloisomerase from zobellia galactanivorans (see paper)
31% identity, 87% coverage of query (147 bits)
Build an alignment for RR42_RS34985 and 31 homologs with ≥ 30% identity
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A0NP48 L-lyxonate dehydratase (EC 4.2.1.176) from Roseibium aggregatum (see paper)
3stpA / A0NP48 Crystal structure of a putative galactonate dehydratase
29% identity, 90% coverage of query (141 bits)
3tteA / A4YVM8 Crystal structure of enolase brado_4202 (target efi-501651) from bradyrhizobium complexed with magnesium and mandelic acid
30% identity, 98% coverage of query (140 bits)
3toyA Crystal structure of enolase brado_4202 (target efi-501651) from bradyrhizobium sp. Ors278 with calcium and acetate bound
30% identity, 98% coverage of query (140 bits)
gci / A9CEQ8 D-galactarolactone cycloisomerase monomer (EC 5.5.1.27) from Agrobacterium fabrum (strain C58 / ATCC 33970) (see paper)
GCI_AGRFC / A9CEQ8 D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see 2 papers)
A9CEQ8 D-galactarolactone cycloisomerase (EC 5.5.1.27) from Agrobacterium tumefaciens (see paper)
4hpnA / A9CEQ8 Crystal structure of a proposed galactarolactone cycloisomerase from agrobacterium tumefaciens, target efi-500704, with bound ca, ordered loops (see paper)
31% identity, 95% coverage of query (137 bits)
4h83F / A4AFX2 Crystal structure of mandelate racemase/muconate lactonizing enzyme (efi target:502127)
28% identity, 98% coverage of query (135 bits)
3sqsA / A8LS88 Crystal structure of a putative mandelate racemase/muconate lactonizing protein from dinoroseobacter shibae dfl 12
29% identity, 89% coverage of query (134 bits)
3no1A Crystal structure of mandelate racemase/muconate lactonizing enzyme from a marine actinobacterium in complex with magnesium
29% identity, 90% coverage of query (134 bits)
lyxD / Q9I1Q2 L-lyxonate dehydratase (EC 4.2.1.176) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
Q9I1Q2 L-lyxonate dehydratase (EC 4.2.1.176) from Pseudomonas aeruginosa (see paper)
28% identity, 83% coverage of query (127 bits)
4hcdA / Q7CSI0 Crystal structure of d-glucarate dehydratase from agrobacterium tumefaciens complexed with magnesium
29% identity, 90% coverage of query (125 bits)
4mmwA Crystal structure of d-glucarate dehydratase from agrobacterium tumefaciens complexed with magnesium, l-xylarohydroxamate and l- lyxarohydroxamate
29% identity, 90% coverage of query (125 bits)
4hclA Crystal structure of d-glucarate dehydratase from agrobacterium tumefaciens complexed with magnesium and l-lyxarohydroxamate
29% identity, 90% coverage of query (125 bits)
NSAR_BACCR / Q81IL5 N-succinyl-L-Arg/Lys racemase; N-succinyl amino acid racemase; NSAR; EC 5.1.1.- from Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) (see paper)
2p88A / Q81IL5 Crystal structure of n-succinyl arg/lys racemase from bacillus cereus atcc 14579 (see paper)
28% identity, 99% coverage of query (122 bits)
2p8cA Crystal structure of n-succinyl arg/lys racemase from bacillus cereus atcc 14579 complexed with n-succinyl arg.
28% identity, 99% coverage of query (122 bits)
2p8bA Crystal structure of n-succinyl arg/lys racemase from bacillus cereus atcc 14579 complexed with n-succinyl lys.
28% identity, 99% coverage of query (122 bits)
DGD_STRBB / D7BPX0 D-galactonate dehydratase family member SBI_01856; D-gluconate dehydratase; EC 4.2.1.-; EC 4.2.1.39 from Streptomyces bingchenggensis (strain BCW-1) (see paper)
30% identity, 88% coverage of query (121 bits)
G4RJQ1 gluconate dehydratase (EC 4.2.1.39) from Thermoproteus tenax (see paper)
31% identity, 76% coverage of query (121 bits)
G3Y683 L-fuconate dehydratase (EC 4.2.1.68) from Aspergillus niger (see paper)
27% identity, 90% coverage of query (120 bits)
GAD_THETE / Q704D2 D-gluconate dehydratase; EC 4.2.1.39 from Thermoproteus tenax (see 2 papers)
gad / CAF18462.1 gluconate dehydratase from Thermoproteus tenax (see paper)
31% identity, 76% coverage of query (120 bits)
4a35A / Q7L5Y1 Crystal structure of human mitochondrial enolase superfamily member 1 (enosf1) (see paper)
26% identity, 85% coverage of query (118 bits)
ENOF1_HUMAN / Q7L5Y1 Mitochondrial enolase superfamily member 1; Antisense RNA to thymidylate synthase; rTS; L-fuconate dehydratase; EC 4.2.1.68 from Homo sapiens (Human) (see 4 papers)
26% identity, 85% coverage of query (118 bits)
1jpmA / O34508 L-ala-d/l-glu epimerase (see paper)
28% identity, 94% coverage of query (117 bits)
AEEP_BACSU / O34508 L-Ala-D/L-Glu epimerase; AE epimerase; AEE; EC 5.1.1.20 from Bacillus subtilis (strain 168) (see 4 papers)
O34508 L-Ala-D/L-Glu epimerase (EC 5.1.1.20) from Bacillus subtilis (see 3 papers)
28% identity, 94% coverage of query (117 bits)
4e4fB / C6D9S0 Crystal structure of enolase pc1_0802 (target efi-502240) from pectobacterium carotovorum subsp. Carotovorum pc1
28% identity, 86% coverage of query (117 bits)
1tkkA The structure of a substrate-liganded complex of the l-ala-d/l-glu epimerase from bacillus subtilis
28% identity, 94% coverage of query (117 bits)
catB / A0F0B3 muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas reinekei (see paper)
28% identity, 96% coverage of query (116 bits)
4ip4A / Q1GLV3 Crystal structure of l-fuconate dehydratase from silicibacter sp. Tm1040 liganded with mg
27% identity, 90% coverage of query (116 bits)
DMGD_HALED / E1V4Y0 D-galactonate dehydratase family member RspA; D-gluconate dehydratase; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.39; EC 4.2.1.8 from Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) (see paper)
28% identity, 86% coverage of query (116 bits)
3n4eA / A1AYL4 Crystal structure of mandelate racemase/muconate lactonizing protein from paracoccus denitrificans pd1222
29% identity, 93% coverage of query (116 bits)
4ip5A Crystal structure of l-fuconate dehydratase from silicibacter sp. Tm1040 liganded with mg and d-erythronohydroxamate
27% identity, 90% coverage of query (116 bits)
3sjnA / A8H9D1 Crystal structure of enolase spea_3858 (target efi-500646) from shewanella pealeana with magnesium bound
27% identity, 97% coverage of query (115 bits)
SSO26655 / Q97VG1 D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (see paper)
26% identity, 86% coverage of query (115 bits)
AEEP_CLOAB / Q97MK4 L-Ala-D/L-Glu epimerase; AE epimerase; AEE; EC 5.1.1.20 from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (see paper)
27% identity, 92% coverage of query (114 bits)
lra3 / Q1NEI8 L-rhamnonate dehydratase (EC 4.2.1.90) from Sphingomonas sp. (strain SKA58) (see paper)
28% identity, 89% coverage of query (114 bits)
MAND_ENT38 / A4WA78 D-galactonate dehydratase family member Ent638_1932; D-mannonate dehydratase; EC 4.2.1.-; EC 4.2.1.8 from Enterobacter sp. (strain 638) (see paper)
27% identity, 86% coverage of query (113 bits)
3p93C Crystal structure of d-mannonate dehydratase from chromohalobacter salexigens complexed with mg,d-mannonate and 2-keto-3-deoxy-d- gluconate
29% identity, 86% coverage of query (113 bits)
3p93A Crystal structure of d-mannonate dehydratase from chromohalobacter salexigens complexed with mg,d-mannonate and 2-keto-3-deoxy-d- gluconate
29% identity, 86% coverage of query (113 bits)
3rgtA Crystal structure of d-mannonate dehydratase from chromohalobacter salexigens complexed with d-arabinohydroxamate
29% identity, 86% coverage of query (112 bits)
4fi4A / B0T0B1 Crystal structure of mannonate dehydratase prk15072 (target efi- 502214) from caulobacter sp. K31
27% identity, 90% coverage of query (111 bits)
MAND1_CAUSK / B0T0B1 D-mannonate dehydratase Caul1427; ManD; EC 4.2.1.8 from Caulobacter sp. (strain K31) (see paper)
27% identity, 90% coverage of query (111 bits)
3dg6A / A0QTN8 Crystal structure of muconate lactonizing enzyme from mucobacterium smegmatis complexed with muconolactone (see paper)
30% identity, 88% coverage of query (111 bits)
3u4fA / A3SMJ4 Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from roseovarius nubinhibens
27% identity, 93% coverage of query (111 bits)
MAND2_CAUVC / Q9AAR4 D-mannonate dehydratase CC0532; ManD; EC 4.2.1.8 from Caulobacter vibrioides (strain ATCC 19089 / CB15) (Caulobacter crescentus) (see paper)
A0A0H3C643 mannonate dehydratase (EC 4.2.1.8) from Caulobacter vibrioides (see paper)
4gmeA / Q9AAR4 Crystal structure of mannonate dehydratase (target efi-502209) from caulobacter crescentus cb15 complexed with magnesium and d-mannonate
26% identity, 90% coverage of query (110 bits)
4m0xA / Q8G9L1 Crystal structure of 2-chloromuconate cycloisomerase from rhodococcus opacus 1cp (see paper)
30% identity, 95% coverage of query (110 bits)
4gmeC Crystal structure of mannonate dehydratase (target efi-502209) from caulobacter crescentus cb15 complexed with magnesium and d-mannonate
26% identity, 90% coverage of query (110 bits)
GAD_SACS2 / Q97U27 D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 2 papers)
Q97U27 gluconate/galactonate dehydratase (EC 4.2.1.140) from Saccharolobus solfataricus (see paper)
26% identity, 86% coverage of query (109 bits)
MAND_PECCP / C6D9S0 D-galactonate dehydratase family member PC1_0802; D-mannonate dehydratase; EC 4.2.1.-; EC 4.2.1.8 from Pectobacterium carotovorum subsp. carotovorum (strain PC1) (see paper)
27% identity, 86% coverage of query (109 bits)
BPHYT_RS16405 galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans PsJN
28% identity, 86% coverage of query (109 bits)
MAND_ECOMS / D8ADB5 D-galactonate dehydratase family member RspA; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.8 from Escherichia coli (strain MS 21-1) (see paper)
27% identity, 86% coverage of query (109 bits)
catB / AAA66202.1 muconate lactonizing enzyme from Pseudomonas putida (see paper)
28% identity, 97% coverage of query (109 bits)
3ekgA / C1DMY1 Crystal structure of l-rhamnonate dehydratase from azotobacter vinelandii complexed with mg and l-tartrate
28% identity, 80% coverage of query (109 bits)
MAND1_CAUVC / Q9A4L8 D-mannonate dehydratase CC2812; ManD; EC 4.2.1.8 from Caulobacter vibrioides (strain ATCC 19089 / CB15) (Caulobacter crescentus) (see paper)
27% identity, 95% coverage of query (109 bits)
salC / Q4KPK2 muconate cycloisomerase I (EC 5.5.1.1; EC 5.5.1.7) from Pseudomonas reinekei (see paper)
Q4KPK2 Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas reinekei (see paper)
27% identity, 95% coverage of query (108 bits)
RspA / b1581 mandelate racemase/muconate lactonizing enzyme family protein RspA from Escherichia coli K-12 substr. MG1655 (see 5 papers)
RSPA_ECOLI / P38104 Starvation-sensing protein RspA from Escherichia coli (strain K12) (see 2 papers)
rspA / RF|NP_416098 starvation-sensing protein rspA from Escherichia coli K12 (see 6 papers)
27% identity, 86% coverage of query (108 bits)
MAND_MARMS / A6VRA1 D-galactonate dehydratase family member Mmwyl1_0037; D-mannonate dehydratase; EC 4.2.1.-; EC 4.2.1.8 from Marinomonas sp. (strain MWYL1) (see paper)
25% identity, 86% coverage of query (108 bits)
4e6mA / Q8ZNH1 Crystal structure of putative dehydratase protein from salmonella enterica subsp. Enterica serovar typhimurium (salmonella typhimurium)
25% identity, 95% coverage of query (108 bits)
MAND_SALG2 / B5RAG0 D-galactonate dehydratase family member RspA; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.8 from Salmonella gallinarum (strain 287/91 / NCTC 13346) (see paper)
26% identity, 86% coverage of query (108 bits)
4kwsA / Q1QT89 Crystal structure of d-mannonate dehydratase from chromohalobacter salexigens complexed with mg and glycerol
28% identity, 90% coverage of query (108 bits)
3qkeA Crystal structure of d-mannonate dehydratase from chromohalobacter salexigens complexed with mg and d-gluconate
28% identity, 90% coverage of query (108 bits)
LGD1 / Q0QWS4 L-galactonate dehydratase (EC 4.2.1.146) from Hypocrea jecorina (see paper)
LGD1_HYPJE / Q0QWS4 L-galactonate dehydratase; EC 4.2.1.146 from Hypocrea jecorina (Trichoderma reesei) (see paper)
Q0QWS4 L-galactonate dehydratase (EC 4.2.1.146) from Trichoderma reesei (see 2 papers)
26% identity, 85% coverage of query (107 bits)
IMAND_ENTCS / C9CN91 D-galactonate dehydratase family member ECAG_02205 from Enterococcus casseliflavus (strain EC10) (see paper)
26% identity, 88% coverage of query (107 bits)
clcB2 / Q8G9L1 chloromuconate cycloisomerase 2 monomer (EC 5.5.1.7) from Rhodococcus opacus (see 3 papers)
Q8G9L1 Chloromuconate cycloisomerase (EC 5.5.1.7) from Rhodococcus opacus (see paper)
29% identity, 96% coverage of query (107 bits)
3tcsB / Q161M1 Crystal structure of a putative racemase from roseobacter denitrificans
27% identity, 89% coverage of query (107 bits)
4ihcB / C6CBG9 Crystal structure of probable mannonate dehydratase dd703_0947 (target efi-502222) from dickeya dadantii ech703
27% identity, 80% coverage of query (107 bits)
IMND1_ENTGE / C8ZZN2 D-galactonate dehydratase family member EGBG_01401 from Enterococcus gallinarum (strain EG2) (see paper)
26% identity, 87% coverage of query (106 bits)
MAND_ECOL6 / Q8FHC7 D-galactonate dehydratase family member RspA; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.8 from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
27% identity, 86% coverage of query (106 bits)
4hnlA / C8ZZN2 Crystal structure of enolase egbg_01401 (target efi-502226) from enterococcus gallinarum eg2
26% identity, 87% coverage of query (106 bits)
MAND_ESCAT / B1ELW6 D-galactonate dehydratase family member RspA; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.8 from Escherichia albertii (strain TW07627) (see paper)
27% identity, 86% coverage of query (106 bits)
4il2B / Q8FHC7 Crystal structure of d-mannonate dehydratase (rspa) from e. Coli cft073 (efi target efi-501585)
27% identity, 86% coverage of query (106 bits)
A3LZU6 L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis (see 2 papers)
27% identity, 78% coverage of query (106 bits)
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