Searching for up to 100 curated homologs for SM_b20508 FitnessBrowser__Smeli:SM_b20508 (327 a.a.)
Found high-coverage hits (≥70%) to 9 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
BPHYT_RS16935 D-galactose ABC transporter, substrate-binding component from Burkholderia phytofirmans PsJN
69% identity, 99% coverage of query (441 bits)
4kzkA / Q2T607 The structure of the periplasmic l-arabinose binding protein from burkholderia thailandensis
57% identity, 92% coverage of query (358 bits)
AraF / b1901 arabinose ABC transporter periplasmic binding protein (EC 7.5.2.13; EC 7.5.2.12) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
AraF / P02924 arabinose ABC transporter periplasmic binding protein (EC 7.5.2.13) from Escherichia coli (strain K12) (see 2 papers)
ARAF_ECOLI / P02924 L-arabinose-binding periplasmic protein; ABP from Escherichia coli (strain K12) (see paper)
TC 3.A.1.2.2 / P02924 AraF aka B1901, component of Arabinose porter from Escherichia coli (see 10 papers)
48% identity, 99% coverage of query (305 bits)
1abeA / P02924 Novel stereospecificity of the l-arabinose-binding protein (see paper)
48% identity, 92% coverage of query (293 bits)
5abpA Substrate specificity and affinity of a protein modulated by bound water molecules
48% identity, 92% coverage of query (293 bits)
1abfA Substrate specificity and affinity of a protein modulated by bound water molecules
48% identity, 92% coverage of query (293 bits)
Pf1N1B4_411 ABC transporter for D-galactose/L-arabinose, substrate-binding component from Pseudomonas fluorescens FW300-N1B4
46% identity, 100% coverage of query (283 bits)
Pf6N2E2_5968 ABC transporter for D-galactose/L-arabinose, substrate-binding component from Pseudomonas fluorescens FW300-N2E2
47% identity, 100% coverage of query (283 bits)
Build an alignment for SM_b20508 and 8 homologs with ≥ 30% identity
Or download the sequences
2fn8A / Q9X053 Thermotoga maritima ribose binding protein ribose bound form (see paper)
26% identity, 73% coverage of query (44.3 bits)
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Lawrence Berkeley National Laboratory