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Searching for up to 100 curated homologs for SM_b20587 FitnessBrowser__Smeli:SM_b20587 (286 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PfGW456L13_4592 3-oxoadipate CoA-transferase (EC 2.8.3.6) from Pseudomonas fluorescens GW456-L13
    71% identity, 99% coverage of query (414 bits)

PS417_06700 3-oxoadipate CoA-transferase (EC 2.8.3.6) from Pseudomonas simiae WCS417
    71% identity, 99% coverage of query (412 bits)

AO353_17195 3-oxoadipate CoA-transferase (EC 2.8.3.6) from Pseudomonas fluorescens FW300-N2E3
    71% identity, 99% coverage of query (412 bits)

CATI_PSEKB / Q8VPF3 3-oxoadipate CoA-transferase subunit A; 3-oxoadipate:succinyl-CoA transferase subunit A; Beta-ketoadipate:succinyl-CoA transferase subunit A; EC 2.8.3.6 from Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) (see paper)
Q8VPF3 3-oxoadipate CoA-transferase (subunit 2/2) (EC 2.8.3.6) from Pseudomonas knackmussii (see 2 papers)
    69% identity, 99% coverage of query (402 bits)

gctA / Q59111 GctA (EC 2.8.3.12) from Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / CCUG 9996 / CIP 106432 / VR4) (see paper)
Q59111 glutaconate CoA-transferase (subunit 2/2) (EC 2.8.3.12) from Acidaminococcus fermentans (see paper)
    33% identity, 95% coverage of query (124 bits)

Build an alignment

Build an alignment for SM_b20587 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

6lp1C / Q386P1 Crystal structure of acetate:succinate coa transferase (asct) from trypanosoma brucei. (see paper)
    25% identity, 78% coverage of query (44.7 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory