Searching for up to 100 curated homologs for SM_b20985 FitnessBrowser__Smeli:SM_b20985 (112 a.a.)
Found high-coverage hits (≥70%) to 23 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
AO353_00810 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Pseudomonas fluorescens FW300-N2E3
52% identity, 92% coverage of query (116 bits)
NASE_BACSU / P42436 Assimilatory nitrite reductase [NAD(P)H] small subunit; EC 1.7.1.4 from Bacillus subtilis (strain 168) (see 4 papers)
43% identity, 75% coverage of query (76.3 bits)
NAGAB_RALSP / O52381 Naphthalene 1,2-dioxygenase/salicylate 5-hydroxylase systems, ferredoxin component; NDO/S5H systems ferredoxin component; Ferredoxin NagAb from Ralstonia sp. (see 2 papers)
30% identity, 93% coverage of query (57.8 bits)
auaF / F3Y662 aurachin D N-monooxygenase from Stigmatella aurantiaca (see paper)
40% identity, 77% coverage of query (54.7 bits)
cnbAb / F4Y9I4 nitroarene dioxygenase ferredoxin component (EC 1.14.12.23) from Stutzerimonas stutzeri (see 2 papers)
F4Y9I4 nitroarene dioxygenase (subunit 3/4) (EC 1.14.12.23) from Pseudomonas stutzeri ZWLR2-1 (see paper)
35% identity, 95% coverage of query (53.9 bits)
ndoA / P0A185 naphthalene 1,2-dioxygenase complex ferredoxin component (EC 1.14.12.12) from Pseudomonas putida (see paper)
NDOA_PSEPU / P0A185 Naphthalene 1,2-dioxygenase system, ferredoxin component from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 4 papers)
nahAb / AAA25905.1 naphthalene 1,2-dioxygenase ferredoxin component from Pseudomonas putida (see 3 papers)
31% identity, 92% coverage of query (52.4 bits)
picB1 / A0A1X9WE61 6-hydroxypicolinate 3-monooxygenase subunit 1 from Alcaligenes faecalis (see paper)
30% identity, 81% coverage of query (51.2 bits)
Build an alignment for SM_b20985 and 7 homologs with ≥ 30% identity
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dntAb / Q6QUY4 2,4-dinitrotoluene dioxygenase complex ferredoxin component (EC 1.14.12.24) from Burkholderia sp. DNT (see 3 papers)
M9PSS0 nitroarene dioxygenase (subunit 2/4) (EC 1.14.12.23) from Diaphorobacter sp. DS2 (see paper)
27% identity, 93% coverage of query (50.8 bits)
ntdAb / P95563 2-nitrotoluene dioxygenase complex ferredoxin component (EC 1.14.12.23) from Pseudomonas sp. (see 3 papers)
30% identity, 93% coverage of query (50.4 bits)
2qpzA / P0A185 Naphthalene 1,2-dioxygenase rieske ferredoxin (see paper)
30% identity, 91% coverage of query (50.1 bits)
nbzAb / Q8RTL5 nitroarene dioxygenase complex ferredoxin component (EC 1.14.12.23; EC 1.14.12.24; EC 1.14.12.12) from Comamonas sp. JS765 (see 2 papers)
Q8RTL5 nitroarene dioxygenase (subunit 3/4) (EC 1.14.12.23) from Comamonas sp. (see paper)
30% identity, 93% coverage of query (50.1 bits)
DNTAB_BURSR / Q45694 2,4-dinitrotoluene dioxygenase system, ferredoxin component from Burkholderia sp. (strain RASC) (see paper)
27% identity, 93% coverage of query (50.1 bits)
nahAb / BAE92155.1 ferredoxin component NahAb of naphthalene dioxygenase from Pseudomonas putida (see 2 papers)
nahAb / AAA25901.1 ferredoxin from Pseudomonas putida (see paper)
30% identity, 92% coverage of query (49.7 bits)
5bokA / M9PSS0 Ferredoxin component of 3-nitrotoluene dioxygenase from diaphorobacter sp. Strain ds2
26% identity, 90% coverage of query (48.5 bits)
YfhW / b2540 putative 3-phenylpropionate/cinnamate dioxygenase ferredoxin subunit (EC 1.14.12.19) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
hcaC / P0ABW0 putative 3-phenylpropionate/cinnamate dioxygenase ferredoxin subunit (EC 1.14.12.19) from Escherichia coli (strain K12) (see 3 papers)
P0ABW0 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase (EC 3.7.1.14) from Escherichia coli (see paper)
hcaC / RF|NP_417035 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit from Escherichia coli K12 (see 5 papers)
32% identity, 90% coverage of query (48.5 bits)
nasB / GB|AAA25099.1 nitrite reductase [NAD(P)H], large subunit from Klebsiella oxytoca (see 2 papers)
32% identity, 96% coverage of query (46.6 bits)
BWI76_RS17365 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Klebsiella michiganensis M5al
32% identity, 96% coverage of query (46.2 bits)
ndmD / H9N291 FMN reductase [NAD(P)H] (EC 1.5.1.39) from Pseudomonas putida (see 2 papers)
NDMD_PSEPU / H9N291 Oxidoreductase NdmD; EC 1.-.-.- from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
27% identity, 89% coverage of query (45.8 bits)
vanA / O05616 vanillate O-demethylase oxygenase component (EC 1.14.13.82) from Pseudomonas sp. (strain HR199 / DSM 7063) (see paper)
35% identity, 73% coverage of query (45.8 bits)
4qdcA / F1CMY8 Crystal structure of 3-ketosteroid-9-alpha-hydroxylase 5 (ksha5) from r. Rhodochrous in complex with fe2/s2 (inorganic) cluster (see paper)
28% identity, 78% coverage of query (45.1 bits)
1fqtA / P37332 Crystal structure of the rieske-type ferredoxin associated with biphenyl dioxygenase (see paper)
bphF / GB|ABE37056.1 biphenyl dioxygenase system ferredoxin component from Burkholderia xenovorans LB400 (see 4 papers)
30% identity, 96% coverage of query (45.1 bits)
KSHA5_RHORH / F1CMY8 3-ketosteroid-9-alpha-monooxygenase, oxygenase component; 3-ketosteroid-9-alpha-hydroxylase, oxygenase component; KSH; Androsta-1,4-diene-3,17-dione 9-alpha-hydroxylase; Rieske-type oxygenase; RO; EC 1.14.15.30 from Rhodococcus rhodochrous (see 2 papers)
F1CMY8 3-ketosteroid 9alpha-monooxygenase (EC 1.14.15.30) from Rhodococcus rhodochrous (see 3 papers)
28% identity, 78% coverage of query (45.1 bits)
4qddA Crystal structure of 3-ketosteroid-9-alpha-hydroxylase 5 (ksha5) from r. Rhodochrous in complex with 1,4-30q-coa
28% identity, 78% coverage of query (45.1 bits)
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Lawrence Berkeley National Laboratory