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Searching for up to 100 curated homologs for SM_b21015 FitnessBrowser__Smeli:SM_b21015 (416 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

rhaEW / P40747 bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis (strain 168) (see paper)
    30% identity, 93% coverage of query (192 bits)

Build an alignment

Build an alignment for SM_b21015 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

SMc02322 rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti 1021
    28% identity, 97% coverage of query (172 bits)

Echvi_1572 Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis KMM 6221, DSM 17526
    27% identity, 96% coverage of query (168 bits)

Dshi_2436 rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae DFL-12
    28% identity, 99% coverage of query (166 bits)

rhaEW / A9WGG0 bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) (see paper)
    30% identity, 92% coverage of query (162 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory