Searching for up to 100 curated homologs for SM_b21528 FitnessBrowser__Smeli:SM_b21528 (275 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 3.A.1.17.4 / Q2BM70 Putative taurine uptake ABC transporter permease protein, component of The taurine uptake system, TauABC from Neptuniibacter caesariensis
    69% identity, 96% coverage of query (330 bits)

TauC / b0367 taurine ABC transporter membrane subunit (EC 7.6.2.7) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
TauC / Q47539 taurine ABC transporter membrane subunit (EC 7.6.2.7) from Escherichia coli (strain K12) (see 2 papers)
TAUC_ECOLI / Q47539 Taurine transport system permease protein TauC from Escherichia coli (strain K12) (see paper)
TC 3.A.1.17.1 / Q47539 TauC aka SSIC aka B0367, component of Taurine (2-aminoethane sulfonate) porter from Escherichia coli (see 4 papers)
    54% identity, 90% coverage of query (244 bits)

TC 3.A.1.17.2 / O85765 SsuC, component of Aromatic sulfonate porter from Pseudomonas putida (see paper)
    32% identity, 86% coverage of query (125 bits)

SsuC / b0934 aliphatic sulfonate ABC transporter membrane subunit (EC 7.6.2.14) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
SsuC / P75851 aliphatic sulfonate ABC transporter membrane subunit (EC 7.6.2.14) from Escherichia coli (strain K12) (see 5 papers)
TC 3.A.1.17.10 / P75851 Putative aliphatic sulfonates transport permease protein SsuC, component of Aliphatic sulfonate (alkanesulfonate) import permease, SsuABC (YcbOEM) and is regluated by the transcriptional activator, Cbl from Escherichia coli (strain K12)
    32% identity, 86% coverage of query (124 bits)

Ac3H11_2561 ABC transporter for L-Histidine, permease component 2 from Acidovorax sp. GW101-3H11
    31% identity, 86% coverage of query (117 bits)

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Build an alignment for SM_b21528 and 5 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

CMPB_SYNE7 / Q55106 Bicarbonate transport system permease protein CmpB from Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805) (Anacystis nidulans R2) (see paper)
TC 3.A.1.16.3 / Q55106 CmpB, component of Bicarbonate porter (activated by low [CO2] mediated by CmpR; (Nishimura et al., 2008)) (see 2 papers)
    29% identity, 85% coverage of query (116 bits)

TC 3.A.1.16.2 / Q7BW13 Integral membrane protein, component of Bispecific cyanate/nitrite transporter (see paper)
    32% identity, 87% coverage of query (113 bits)

RIBX_CHLAA / A9WGD1 Riboflavin transport system permease protein RibX from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) (see paper)
TC 3.A.1.17.14 / A9WGD1 Riboflavin transport system permease protein RibX, component of Riboflavin uptake porter, RibXY (RibX, 168 aas and 6 TMSs; RibY, 351 aas) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
    33% identity, 80% coverage of query (102 bits)

AZOBR_RS18555 ABC transporter for nitrate, permease component from Azospirillum brasilense Sp245
    30% identity, 70% coverage of query (101 bits)

TC 3.A.1.16.4 / Q8YRV7 ABC nitrate transport permease protein, component of Nitrate uptake system, NrtABCD from Nostoc sp. (strain PCC 7120 / UTEX 2576) (see paper)
    32% identity, 79% coverage of query (101 bits)

NRTB_SYNE7 / P38044 Nitrate import permease protein NrtB from Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805) (Anacystis nidulans R2) (see paper)
TC 3.A.1.16.1 / P38044 NrtB, component of Four component nitrate/nitrite porter (see paper)
    25% identity, 85% coverage of query (101 bits)

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