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Searching for up to 100 curated homologs for SMa0564 FitnessBrowser__Smeli:SMa0564 (367 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Q8ZUN8 glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pyrobaculum aerophilum (see 2 papers)
    36% identity, 97% coverage of query (198 bits)

3a9gA / Q8ZUN8 Crystal structure of pqq-dependent sugar dehydrogenase apo-form (see paper)
    36% identity, 87% coverage of query (195 bits)

3a9hA Crystal structure of pqq-dependent sugar dehydrogenase holo-form
    36% identity, 87% coverage of query (195 bits)

3dasA / Q9Z571 Structure of the pqq-bound form of aldose sugar dehydrogenase (adh) from streptomyces coelicolor
    37% identity, 85% coverage of query (177 bits)

I7A144 glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Thermus thermophilus (see paper)
    39% identity, 83% coverage of query (162 bits)

2ismB / Q5SKS3 Crystal structure of the putative oxidoreductase (glucose dehydrogenase) (ttha0570) from thermus theromophilus hb8
    39% identity, 83% coverage of query (157 bits)

sndH / Q402A8 L-sorbosone dehydrogenase 1 from Ketogulonicigenium vulgare (see paper)
    31% identity, 73% coverage of query (129 bits)

Build an alignment

Build an alignment for SMa0564 and 7 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

YliI / b0837 aldose sugar dehydrogenase YliI from Escherichia coli K-12 substr. MG1655 (see 5 papers)
yliI / P75804 aldose sugar dehydrogenase YliI from Escherichia coli (strain K12) (see 5 papers)
YLII_ECOLI / P75804 Aldose sugar dehydrogenase YliI; Asd; Soluble aldose sugar dehydrogenase YliI; EC 1.1.5.- from Escherichia coli (strain K12) (see 2 papers)
    29% identity, 89% coverage of query (115 bits)

2g8sA / P75804 Crystal structure of the soluble aldose sugar dehydrogenase (asd) from escherichia coli in the apo-form (see paper)
    30% identity, 81% coverage of query (113 bits)

hcuB / BAC81751.1 hydrophobic compound transport factor from Pseudomonas aeruginosa (see paper)
    29% identity, 82% coverage of query (110 bits)

7cgzA Glucose dehydrogenase
    30% identity, 80% coverage of query (100 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory