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Searching for up to 100 curated homologs for SMc00355 FitnessBrowser__Smeli:SMc00355 (350 a.a.)

Found high-coverage hits (≥70%) to 13 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

2a5hB / Q9XBQ8 2.1 angstrom x-ray crystal structure of lysine-2,3-aminomutase from clostridium subterminale sb4, with michaelis analog (l-alpha-lysine external aldimine form of pyridoxal-5'-phosphate). (see paper)
    37% identity, 96% coverage of query (243 bits)

kamA / Q9XBQ8 lysine 2,3-aminomutase (EC 5.4.3.2) from Clostridium subterminale (see 4 papers)
KAMA_CLOSU / Q9XBQ8 L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Clostridium subterminale (see 6 papers)
    37% identity, 96% coverage of query (243 bits)

G3F9W8 lysine 2,3-aminomutase (EC 5.4.3.2) from Methanocalculus chunghsingensis (see paper)
    39% identity, 91% coverage of query (232 bits)

ABLA_METMP / Q6LYX4 L-lysine 2,3-aminomutase; LAM; EC 5.4.3.2 from Methanococcus maripaludis (strain S2 / LL) (see paper)
Q6LYX4 lysine 2,3-aminomutase (EC 5.4.3.2) from Methanococcus maripaludis (see paper)
    38% identity, 93% coverage of query (228 bits)

A0A0K0QCW0 lysine 2,3-aminomutase (EC 5.4.3.2) from Bacillus thuringiensis serovar kurstaki (see paper)
    34% identity, 98% coverage of query (225 bits)

KAMA_BACSU / O34676 L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Bacillus subtilis (strain 168) (see 2 papers)
    35% identity, 98% coverage of query (222 bits)

KAMA_FUSNN / Q8RHX4 L-lysine 2,3-aminomutase; LAM; KAM; EC 5.4.3.2 from Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355) (see paper)
    35% identity, 92% coverage of query (219 bits)

G3F9X2 lysine 2,3-aminomutase (EC 5.4.3.2) from Methanohalophilus portucalensis (see paper)
    36% identity, 91% coverage of query (210 bits)

ABLA_METMA / Q8PYC9 L-lysine 2,3-aminomutase; LAM; EC 5.4.3.2 from Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (Methanosarcina frisia) (see paper)
Q8PYC9 lysine 2,3-aminomutase (EC 5.4.3.2) from Methanosarcina mazei (see 2 papers)
    37% identity, 97% coverage of query (208 bits)

blsG / Q841K7 L-arginine 2,3 aminomutase from Streptomyces griseochromogenes (see paper)
    37% identity, 82% coverage of query (202 bits)

kamA / Q185C5 glutamate 2,3-aminomutase (EC 5.4.3.9) from Clostridioides difficile (strain 630) (see paper)
EAM_CLOD6 / Q185C5 Glutamate 2,3-aminomutase; EC 5.4.3.9 from Clostridioides difficile (strain 630) (Peptoclostridium difficile) (see paper)
    36% identity, 86% coverage of query (201 bits)

EpmB / b4146 lysine 2,3-aminomutase from Escherichia coli K-12 substr. MG1655 (see 6 papers)
epmB / P39280 lysine 2,3-aminomutase from Escherichia coli (strain K12) (see 5 papers)
EPMB_ECOLI / P39280 L-lysine 2,3-aminomutase; LAM; EF-P post-translational modification enzyme B; EC 5.4.3.- from Escherichia coli (strain K12) (see 4 papers)
    34% identity, 82% coverage of query (174 bits)

EPMB_SALTY / Q8ZKB8 L-lysine 2,3-aminomutase; LAM; EF-P post-translational modification enzyme B; EC 5.4.3.- from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    36% identity, 79% coverage of query (171 bits)

Build an alignment

Build an alignment for SMc00355 and 13 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory