Searching for up to 100 curated homologs for SMc00573 (78 a.a.)
Found high-coverage hits (≥70%) to 73 curated proteins.
Removed hits that are identical to the query, leaving 72
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
P12784 Acyl carrier protein; ACP from Cereibacter sphaeroides (Rhodobacter sphaeroides)
81% identity, 88% coverage of query (112 bits)
P80920 Acyl carrier protein; ACP from Leucothrix mucor
61% identity, 99% coverage of query (97.4 bits)
P0A2W3 holo-[acyl-carrier-protein] synthase (EC 2.7.8.7) from Vibrio harveyi (see paper)
62% identity, 99% coverage of query (97.1 bits)
P80923 Acyl carrier protein; ACP from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
62% identity, 100% coverage of query (94.0 bits)
acpP / P0A6A8 acyl carrier protein from Escherichia coli (strain K12) (see 5 papers)
ACP_ECOLI / P0A6A8 Acyl carrier protein; ACP; Cytosolic-activating factor; CAF; Fatty acid synthase acyl carrier protein from Escherichia coli (strain K12) (see paper)
AcpP / ECOCYC|LIPOYL-ACP acyl carrier protein (ACP) from Escherichia coli K12 (see 2 papers)
acpP acyl carrier protein from Escherichia coli K12 (see 14 papers)
62% identity, 100% coverage of query (93.2 bits)
P80922 Acyl carrier protein; ACP from Oceanospirillum linum
62% identity, 94% coverage of query (93.2 bits)
ACP_STAA8 / Q2FZ51 Acyl carrier protein; ACP from Staphylococcus aureus (strain NCTC 8325 / PS 47) (see paper)
69% identity, 87% coverage of query (92.0 bits)
2facA / P0A6A8 Crystal structure of e. Coli hexanoyl-acp (see paper)
61% identity, 99% coverage of query (90.9 bits)
5vcbD Crystal structure of holo-(acyl-carrier-protein) synthase:holo(acyl- carrier-protein) complex from escherichia coli.
61% identity, 99% coverage of query (90.9 bits)
4kehC Crosslinked crystal structure of type ii fatty synthase dehydratase, faba, and acyl carrier protein, acpp
61% identity, 99% coverage of query (90.9 bits)
3ny7B Stas domain of ychm bound to acp
61% identity, 99% coverage of query (90.9 bits)
2faeA Crystal structure of e. Coli decanoyl-acp
61% identity, 99% coverage of query (90.9 bits)
2fadA Crystal structure of e. Coli heptanoyl-acp
61% identity, 99% coverage of query (90.9 bits)
2ehtA / O67611 Crystal structure of acyl carrier protein from aquifex aeolicus (form 2)
59% identity, 90% coverage of query (90.1 bits)
1l0iA Crystal structure of butyryl-acp i62m mutant
60% identity, 99% coverage of query (89.7 bits)
2qnwA / O77470 Toxoplasma gondii apicoplast-targeted acyl carrier protein
59% identity, 96% coverage of query (89.0 bits)
P80918 Acyl carrier protein; ACP from Comamonas testosteroni (Pseudomonas testosteroni)
56% identity, 100% coverage of query (89.0 bits)
acpP / RF|NP_440632.1 acyl carrier protein from Synechocystis sp. PCC 6803 (see 2 papers)
63% identity, 94% coverage of query (88.2 bits)
6n3pI Crosslinked acpp=fabz complex from e. Coli type ii fas
63% identity, 92% coverage of query (88.2 bits)
5usrK Crystal structure of human nfs1-isd11 in complex with e. Coli acyl- carrier protein at 3.09 angstroms
63% identity, 87% coverage of query (86.3 bits)
P80643 Acyl carrier protein; ACP from Bacillus subtilis (strain 168)
58% identity, 99% coverage of query (84.3 bits)
2x2bA / P80643 Crystal structure of malonyl-acp (acyl carrier protein) from bacillus subtilis (see paper)
59% identity, 96% coverage of query (82.0 bits)
8jfhE / Q5EDC8 Crystal structure of 3-oxoacyl-acp reductase fabg in complex with NADP+ and 3-keto-octanoyl-acp from helicobacter pylori in an inactive form that priors the acyl substrate delivery (see paper)
55% identity, 88% coverage of query (81.6 bits)
8jfnB Crystal structure of enoyl-acp reductase fabi in complex with NAD+ and crotonyl-acp from helicobacter pylori
55% identity, 88% coverage of query (81.6 bits)
TC 3.D.1.6.4 / Q6UKY4 143, component of The green algal H+ translocating NADH dehydrogenase (NDH) complex (42 subunits; 33 included here) from Chlamydomonas reinhardtii (see paper)
59% identity, 90% coverage of query (78.2 bits)
6lvuA / Q9WZD0 Crystal structure of apo acyl carrier protein from thermotoga maritima (see paper)
56% identity, 94% coverage of query (74.3 bits)
TC 3.D.1.6.3 / O80800 Acyl carrier protein - Arabidopsis thaliana (Mouse-ear cress)., component of The higher plant H+ translocating NADH dehydrogenase (NDH) complex (41 subunits; 23 included here) from Arabidopsis thaliana (Mouse-ear cress) (see paper)
53% identity, 92% coverage of query (73.6 bits)
8e73AB / A0A1S3VXS7 8e73AB (see paper)
54% identity, 92% coverage of query (73.2 bits)
8beeU / O80800 Cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci peripheral core) (see paper)
53% identity, 92% coverage of query (72.8 bits)
3gzlA / O77077 Crystal structure of holo pfacp disulfide-linked dimer (see paper)
51% identity, 87% coverage of query (68.9 bits)
7zmbQ / G0SBG9 Cryoem structure of mitochondrial complex i from chaetomium thermophilum (state 2) (see paper)
48% identity, 91% coverage of query (65.5 bits)
darC / AAN18033.1 acyl carrier protein from Pseudomonas chlororaphis subsp. aurantiaca (see paper)
42% identity, 97% coverage of query (64.3 bits)
TC 3.D.1.6.2 / P11943 9.6, component of The fungal H+ translocating NADH dehydrogenase (NDH) complex (38 subunits; 35 included here) from Neurospora crassa (see 4 papers)
58% identity, 71% coverage of query (64.3 bits)
P11943 Acyl carrier protein, mitochondrial; ACP; NADH-ubiquinone oxidoreductase 9.6 kDa subunit from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
58% identity, 71% coverage of query (64.3 bits)
ACP_BRAHO / O34163 Acyl carrier protein; ACP from Brachyspira hyodysenteriae (Treponema hyodysenteriae) (see paper)
44% identity, 86% coverage of query (63.9 bits)
8ba0U / Q94519 Drosophila melanogaster complex i in the twisted state (dm2) (see paper)
44% identity, 90% coverage of query (62.4 bits)
8eszAC NADH-ubiquinone oxidoreductase chain 1
44% identity, 90% coverage of query (62.4 bits)
7ar7T / P53665 Cryo-em structure of arabidopsis thaliana complex-i (open conformation) (see paper)
47% identity, 90% coverage of query (62.0 bits)
AAB96840.1 acyl carrier protein precursor from Arabidopsis thaliana (see paper)
47% identity, 90% coverage of query (62.0 bits)
7b0nU / A0A1D8NG21 3.7-angstrom structure of Yarrowia lipolytica complex I with an R121M mutation in NUCM. (see paper)
52% identity, 77% coverage of query (61.6 bits)
6rfqQ Cryo-em structure of a respiratory complex i assembly intermediate with ndufaf2
52% identity, 77% coverage of query (61.6 bits)
ACP5_ARATH / O04652 Acyl carrier protein 5, chloroplastic from Arabidopsis thaliana (Mouse-ear cress) (see paper)
47% identity, 92% coverage of query (59.7 bits)
NDUFAB1 / O14561 mitochondrial acyl carrier protein from Homo sapiens (see 6 papers)
ACPM_HUMAN / O14561 Acyl carrier protein, mitochondrial; ACP; CI-SDAP; NADH-ubiquinone oxidoreductase 9.6 kDa subunit from Homo sapiens (Human) (see 8 papers)
43% identity, 90% coverage of query (58.9 bits)
ACPM_MOUSE / Q9CR21 Acyl carrier protein, mitochondrial; ACP; CI-SDAP; NADH-ubiquinone oxidoreductase 9.6 kDa subunit from Mus musculus (Mouse) (see paper)
43% identity, 90% coverage of query (58.9 bits)
ACPM_BOVIN / P52505 Acyl carrier protein, mitochondrial; ACP; CI-SDAP; NADH-ubiquinone oxidoreductase 9.6 kDa subunit from Bos taurus (Bovine) (see 3 papers)
TC 3.D.1.6.1 / P52505 SDAP (8), component of The vertebrate H+-translocating NADH dehydrogenase (NDH) complex (45 subunits) from Bos taurus (Bovine) (see paper)
43% identity, 90% coverage of query (58.9 bits)
5gupO structure of mammalian respiratory supercomplex I1III2IV1
43% identity, 90% coverage of query (58.9 bits)
6oddA Crystal structure of the human complex acp-isd11
43% identity, 90% coverage of query (58.9 bits)
7oi6w Cryo-em structure of late human 39s mitoribosome assembly intermediates, state 1
43% identity, 90% coverage of query (58.9 bits)
7v2dX Deactive state complex i from q10 dataset
43% identity, 90% coverage of query (58.9 bits)
7ak6U / Q9CR21 Cryo-em structure of nd6-p25l mutant respiratory complex i from mus musculus at 3.8 a (see paper)
43% identity, 90% coverage of query (58.5 bits)
5lnkX Entire ovine respiratory complex i
43% identity, 90% coverage of query (58.5 bits)
P15543 Acyl carrier protein 3, chloroplastic; Acyl carrier protein III; ACP III from Hordeum vulgare (Barley)
45% identity, 94% coverage of query (57.4 bits)
P11830 Acyl carrier protein; ACP from Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338)
40% identity, 90% coverage of query (57.0 bits)
2kooA / P72393 Nmr solution structures of hexanoyl-acp from the streptomyces coelicolor fatty acid synthase (see paper)
52% identity, 79% coverage of query (56.6 bits)
2kosA Nmr solution structures of octanoyl-acp from streptomyces coelicolor fatty acid synthase
52% identity, 79% coverage of query (56.6 bits)
2korA Nmr solution structures of 2-octenoyl-acp from streptomyces coelicolor fatty acid synthase
52% identity, 79% coverage of query (56.6 bits)
2koqA Nmr solution structures of 3-hydroxyoctanoyl-acp from streptomyces coelicolor fatty acid synthase
52% identity, 79% coverage of query (56.6 bits)
2kopA Nmr solution structures of 3-oxooctanyl-acp from streptomyces coelicolor fatty acid synthase
52% identity, 79% coverage of query (56.6 bits)
ACP1_ARATH / P11829 Acyl carrier protein 1, chloroplastic; ACP-1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
43% identity, 88% coverage of query (55.1 bits)
Acl1 / Q9XF20 holo-[acyl carrier protein] from Capsicum chinense (see paper)
46% identity, 87% coverage of query (55.1 bits)
ACP3_ARATH / P25702 Acyl carrier protein 3, chloroplastic; ACP-3 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
45% identity, 87% coverage of query (53.9 bits)
ACP2_ARATH / P25701 Acyl carrier protein 2, chloroplastic; ACP-2 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
45% identity, 87% coverage of query (53.5 bits)
8iufAB 8iufAB (see paper)
44% identity, 91% coverage of query (53.5 bits)
P02902 Acyl carrier protein 1, chloroplastic; ACP I; Acyl carrier protein I from Hordeum vulgare (Barley)
47% identity, 88% coverage of query (53.5 bits)
ACPM_MYCTU / P9WQF3 Meromycolate extension acyl carrier protein; ACP from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
41% identity, 76% coverage of query (52.0 bits)
A0R0B3 Meromycolate extension acyl carrier protein; ACP from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)
42% identity, 76% coverage of query (52.0 bits)
8iufAC 8iufAC (see paper)
46% identity, 90% coverage of query (51.6 bits)
2fvaA / P07854 Structure of 18:0-acp with docked fatty acid (see paper)
45% identity, 88% coverage of query (51.2 bits)
P07854 Acyl carrier protein 1, chloroplastic; ACP I; Acyl carrier protein I from Spinacia oleracea (Spinach)
45% identity, 88% coverage of query (51.2 bits)
ACP4_ARATH / Q9SW21 Acyl carrier protein 4, chloroplastic from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
41% identity, 88% coverage of query (50.1 bits)
P80921 Acyl carrier protein; ACP from Myxococcus xanthus
42% identity, 86% coverage of query (49.3 bits)
ACPXL_RHILV / P0A2W5 Acyl carrier protein AcpXL from Rhizobium leguminosarum bv. viciae (see paper)
36% identity, 72% coverage of query (40.8 bits)
Build an alignment for SMc00573 and 72 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory