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Searching for up to 100 curated homologs for SMc00673 FitnessBrowser__Smeli:SMc00673 (461 a.a.)

Found high-coverage hits (≥70%) to 23 curated proteins.

Removed hits that are identical to the query, leaving 22

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PfGW456L13_330 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens GW456-L13
    58% identity, 98% coverage of query (540 bits)

hutF / Q4KJP1 formiminoglutamate deiminase subunit (EC 3.5.3.13) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) (see paper)
    58% identity, 98% coverage of query (540 bits)

Pf1N1B4_1591 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens FW300-N1B4
    58% identity, 98% coverage of query (538 bits)

AO353_12235 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens FW300-N2E3
    58% identity, 98% coverage of query (534 bits)

AO356_09645 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens FW300-N2C3
    58% identity, 98% coverage of query (530 bits)

Pf6N2E2_3808 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens FW300-N2E2
    58% identity, 98% coverage of query (530 bits)

PS417_01705 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas simiae WCS417
    57% identity, 98% coverage of query (528 bits)

4rdvB / Q9HU77 The structure of n-formimino-l-glutamate iminohydrolase from pseudomonas aeruginosa complexed with n-formimino-l-aspartate
    58% identity, 98% coverage of query (504 bits)

HUTF_PSEAE / Q9HU77 Formimidoylglutamate deiminase; Formiminoglutamate deiminase; N-formimino-L-glutamate deiminase; N-formimino-L-glutamate iminohydrolase; EC 3.5.3.13 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 3 papers)
Q9HU77 formimidoylglutamate deiminase (EC 3.5.3.13); formimidoylglutamase (EC 3.5.3.8) from Pseudomonas aeruginosa (see paper)
    58% identity, 98% coverage of query (504 bits)

3mduA The structure of n-formimino-l-glutamate iminohydrolase from pseudomonas aeruginosa complexed with n-guanidino-l-glutamate
    58% identity, 98% coverage of query (504 bits)

4f0lB / Q2YIL4 Crystal structure of amidohydrolase from brucella melitensis
    53% identity, 99% coverage of query (451 bits)

Ac3H11_2549 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Acidovorax sp. GW101-3H11
    50% identity, 96% coverage of query (416 bits)

PGA1_c36360 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Phaeobacter inhibens BS107
    49% identity, 98% coverage of query (400 bits)

Build an alignment

Build an alignment for SMc00673 and 13 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

PA0142 / Q9I6Z0 8-oxoguanine deaminase monomer (EC 3.5.4.32) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
OXODE_PSEAE / Q9I6Z0 8-oxoguanine deaminase; EC 3.5.4.32 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
Q9I6Z0 8-oxoguanine deaminase (EC 3.5.4.32) from Pseudomonas aeruginosa (see paper)
    24% identity, 84% coverage of query (79.3 bits)

4dzhA / Q8P8H1 Crystal structure of an adenosine deaminase from xanthomonas campestris (target nysgrc-200456) with bound zn
    26% identity, 84% coverage of query (74.3 bits)

3lnpA / D3KFX9 Crystal structure of amidohydrolase family protein olei01672_1_465 from oleispira antarctica (see paper)
    23% identity, 89% coverage of query (64.3 bits)

IXPDE_UNKP / P0CI72 Isoxanthopterin deaminase; EC 3.5.4.11 from Unknown prokaryotic organism (see paper)
P0CI72 pterin deaminase (EC 3.5.4.11) from unidentified prokaryotic organism (see paper)
    25% identity, 83% coverage of query (62.4 bits)

mtaD / Q9X034 5-methylthioadenosine/S-adenosylhomocysteine deaminase (EC 3.5.4.31; EC 3.5.4.28) from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
MTAD_THEMA / Q9X034 5-methylthioadenosine/S-adenosylhomocysteine deaminase; MTA/SAH deaminase; EC 3.5.4.28; EC 3.5.4.31 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
Q9X034 S-methyl-5'-thioadenosine deaminase (EC 3.5.4.31) from Thermotoga maritima (see paper)
    24% identity, 93% coverage of query (59.3 bits)

1p1mA / Q9X034 Structure of thermotoga maritima amidohydrolase tm0936 bound to ni and methionine
    24% identity, 93% coverage of query (58.9 bits)

2plmA Crystal structure of the protein tm0936 from thermotoga maritima complexed with zn and s-inosylhomocysteine
    24% identity, 93% coverage of query (58.9 bits)

4f0rA / Q7NZ90 Crystal structure of an adenosine deaminase homolog from chromobacterium violaceum (target nysgrc-019589) bound zn and 5'- methylthioadenosine (unproductive complex)
    24% identity, 85% coverage of query (57.4 bits)

4f0sA Crystal structure of an adenosine deaminase homolog from chromobacterium violaceum (target nysgrc-019589) with bound inosine.
    24% identity, 85% coverage of query (57.4 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory