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Searching for up to 100 curated homologs for SMc00881 FitnessBrowser__Smeli:SMc00881 (306 a.a.)

Found high-coverage hits (≥70%) to 7 curated proteins.

Removed hits that are identical to the query, leaving 6

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

lgnF / BAM68209.1 2-keto-3-deoxygalactonate kinase lgnF from Paracoccus laeviglucosivorans (see 2 papers)
    53% identity, 99% coverage of query (289 bits)

N515DRAFT_1233 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) from Dyella japonica UNC79MFTsu3.2
    39% identity, 92% coverage of query (147 bits)

YidV / b3693 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178; EC 2.7.1.58) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
dgoK / P31459 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178) from Escherichia coli (strain K12) (see 3 papers)
DGOK_ECOLI / P31459 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase; EC 2.7.1.58 from Escherichia coli (strain K12) (see paper)
    34% identity, 97% coverage of query (138 bits)

A6TFZ6 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) from Klebsiella pneumoniae (see paper)
    36% identity, 97% coverage of query (136 bits)

BPHYT_RS16950 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) from Burkholderia phytofirmans PsJN
    38% identity, 89% coverage of query (135 bits)

HSERO_RS05160 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) from Herbaspirillum seropedicae SmR1
    35% identity, 96% coverage of query (135 bits)

Build an alignment

Build an alignment for SMc00881 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory