Sites on a Tree

 

Searching for up to 100 curated homologs for SMc03063 FitnessBrowser__Smeli:SMc03063 (380 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

Removed hits that are identical to the query, leaving 1

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Dshi_1650 glucose/maltose/trehalose/sucrose ABC transporter, permease component 2 from Dinoroseobacter shibae DFL-12
    59% identity, 98% coverage of query (409 bits)

Build an alignment

Build an alignment for SMc03063 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory