Searching for up to 100 curated homologs for SMc04119 FitnessBrowser__Smeli:SMc04119 (406 a.a.)

Found high-coverage hits (≥70%) to 16 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Tlr / b4383 phosphopentomutase (EC 5.4.2.7) from Escherichia coli K-12 substr. MG1655 (see 38 papers)
deoB / P0A6K6 phosphopentomutase (EC 5.4.2.7) from Escherichia coli (strain K12) (see 37 papers)
P0A6K6 phosphopentomutase (EC 5.4.2.7) from Escherichia coli (see paper)
deoB / RF|NP_418800 phosphopentomutase; EC 5.4.2.7 from Escherichia coli K12 (see 6 papers)
deoB phosphopentomutase; EC 5.4.2.7 from Escherichia coli K12 (see paper)
    57% identity, 100% coverage of query (473 bits)

P0A6K6 Phosphopentomutase; Phosphodeoxyribomutase; EC 5.4.2.7 from Escherichia coli (strain K12)
    57% identity, 100% coverage of query (473 bits)

SO1219 Phosphopentomutase (EC 5.4.2.7) from Shewanella oneidensis MR-1
    57% identity, 100% coverage of query (461 bits)

Dshi_0829 Phosphopentomutase (EC 5.4.2.7) from Dinoroseobacter shibae DFL-12
    53% identity, 100% coverage of query (409 bits)

A0A518Y5Z2 purine-nucleoside phosphorylase (EC 2.4.2.1) from Helicobacter pylori (see paper)
    48% identity, 100% coverage of query (402 bits)

Q818Z9 phosphopentomutase (EC 5.4.2.7) from Bacillus cereus (see 2 papers)
    44% identity, 100% coverage of query (321 bits)

3ot9A Phosphopentomutase from bacillus cereus bound to glucose-1,6- bisphosphate
    44% identity, 100% coverage of query (320 bits)

3m8zA Phosphopentomutase from bacillus cereus bound with ribose-5-phosphate
    44% identity, 100% coverage of query (320 bits)

4lr7A / Q818Z9 Phosphopentomutase s154a variant (see paper)
    44% identity, 100% coverage of query (319 bits)

4lr9A Phosphopentomutase s154a variant soaked with 2,3-dideoxyribose 5- phosphate
    44% identity, 100% coverage of query (319 bits)

Q9WY14 phosphopentomutase (EC 5.4.2.7) from Thermotoga maritima (see paper)
    43% identity, 99% coverage of query (299 bits)

B3ITC5 phosphopentomutase (EC 5.4.2.7) from Lysinibacillus sphaericus (see paper)
    42% identity, 100% coverage of query (290 bits)

DEOB_STRR6 / Q8DQD0 Phosphopentomutase; Phosphodeoxyribomutase; EC 5.4.2.7 from Streptococcus pneumoniae (strain ATCC BAA-255 / R6) (see paper)
    41% identity, 100% coverage of query (267 bits)

4n7tA / Q8DTU0 Crystal structure of phosphorylated phosphopentomutase from streptococcus mutans
    38% identity, 100% coverage of query (255 bits)

deoB / AAC45496.1 phosphopentomutase from Lactococcus lactis subsp. cremoris (see paper)
    38% identity, 100% coverage of query (254 bits)

Build an alignment

Build an alignment for SMc04119 and 15 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

YhfW / b3380 putative mutase YhfW from Escherichia coli K-12 substr. MG1655 (see 2 papers)
yhfW / RF|NP_417839 uncharacterized protein yhfW from Escherichia coli K12 (see paper)
    29% identity, 100% coverage of query (98.6 bits)

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