Sites on a Tree

 

Searching for up to 100 curated homologs for SMc04148 FitnessBrowser__Smeli:SMc04148 (789 a.a.)

Found high-coverage hits (≥70%) to 1 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

tdm / Q5LT52 trimethylamine-oxide aldolase (EC 4.1.2.32) from Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (see 2 papers)
TDM_RUEPO / Q5LT52 Trimethylamine-oxide aldolase; Trimethylamine N-oxide demethylase; TMAO demethylase; Tdm; EC 4.1.2.32 from Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi) (see paper)
    63% identity, 100% coverage of query (1051 bits)

Build an alignment

Build an alignment for SMc04148 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory