Sites on a Tree

 

Searching for up to 100 curated homologs for SO0109 (77 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

YedF / b1930 putative sulfurtransferase YedF from Escherichia coli K-12 substr. MG1655 (see 4 papers)
    82% identity, 100% coverage of query (137 bits)

8j4cB / G0GAP6 Yeee(tsua)-yeed(tsub) complex for thiosulfate uptake (see paper)
    38% identity, 88% coverage of query (47.4 bits)

tusA / P0A890 sulfur transfer protein TusA from Escherichia coli (strain K12) (see 12 papers)
TUSA_ECOLI / P0A890 Sulfur carrier protein TusA; Sulfur mediator TusA; Sulfur transfer protein TusA; tRNA 2-thiouridine synthesizing protein A from Escherichia coli (strain K12) (see 4 papers)
TUSA_ECO57 / P0A892 Sulfur carrier protein TusA; Sulfur mediator TusA; Sulfur transfer protein TusA; tRNA 2-thiouridine synthesizing protein A from Escherichia coli O157:H7 (see paper)
tusA sulfurtransferase TusA; EC 2.8.1; EC 2.8.1.- from Escherichia coli K12 (see 7 papers)
    32% identity, 94% coverage of query (47.0 bits)

TC 9.B.102.1.12 / Q8FLY1 YeeE/YedE protein with 9 TMSs and a C-terminal SirA/YedF/YeeD/YvrY domain of about 100 aas. The hydrophilic SirA α/β sandwich from Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
    33% identity, 79% coverage of query (46.2 bits)

Build an alignment

Build an alignment for SO0109 and 4 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

tusA / D3RPC0 TusA sulfur-carrier protein from Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) (see 2 papers)
TUSA_ALLVD / D3RPC0 Sulfur carrier protein TusA from Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) (Chromatium vinosum) (see 2 papers)
    28% identity, 92% coverage of query (45.8 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory