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Searching for up to 100 curated homologs for Shew_2785 (85 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

CH_091751 ferredoxin from Pseudomonas aeruginosa (see paper)
    70% identity, 95% coverage of query (117 bits)

2fgoA / Q9I6D2 Structure of the 2[4fe-4s] ferredoxin from pseudomonas aeruginosa (see paper)
    70% identity, 95% coverage of query (117 bits)

FER_ALLVD / P00208 Ferredoxin; 2[4Fe-4S] ferredoxin from Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) (Chromatium vinosum) (see 4 papers)
fdx / GI|1518927 ferredoxin (see 3 papers)
    65% identity, 96% coverage of query (114 bits)

3eunA / P00208 Crystal structure of the 2[4fe-4s] c57a ferredoxin variant from allochromatium vinosum (see paper)
    63% identity, 95% coverage of query (110 bits)

YfhL / b2562 putative 4Fe-4S cluster-containing protein YfhL from Escherichia coli K-12 substr. MG1655 (see 3 papers)
YFHL_ECOLI / P52102 Ferredoxin YfhL; EcFd from Escherichia coli (strain K12) (see paper)
    64% identity, 93% coverage of query (104 bits)

2zvsA / P52102 Crystal structure of the 2[4fe-4s] ferredoxin from escherichia coli (see paper)
    63% identity, 92% coverage of query (102 bits)

FDX2_SORC5 / A9FH21 Ferredoxin Fdx2 from Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56)) (see paper)
    56% identity, 88% coverage of query (89.7 bits)

fdx / CAA12251.1 ferredoxin from Thauera aromatica (see paper)
    53% identity, 95% coverage of query (86.3 bits)

1rgvA / O88151 Crystal structure of the ferredoxin from thauera aromatica (see paper)
    53% identity, 94% coverage of query (84.0 bits)

fdxN / AAC33373.1 FdxN from Rippkaea orientalis PCC 8801 (see paper)
    36% identity, 89% coverage of query (55.1 bits)

1durA / P00193 Replacement for 1fdx 2(4fe4s) ferredoxin from (now) peptostreptococcus asaccharolyticus
    43% identity, 72% coverage of query (43.1 bits)

Build an alignment

Build an alignment for Shew_2785 and 11 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory