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Searching for up to 100 curated homologs for Synpcc7942_0354 FitnessBrowser__SynE:Synpcc7942_0354 (542 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

NAGZ_BACSU / P40406 Beta-hexosaminidase; Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase; N-acetylglucosaminidase; ORF1; EC 3.2.1.52 from Bacillus subtilis (strain 168) (see 2 papers)
P40406 beta-N-acetylhexosaminidase (EC 3.2.1.52) from Bacillus subtilis (see paper)
AAA64351.1 β-N-acetylglucosaminidase (NagZ;YbbD;YzbA;BSU01660) (EC 3.2.1.52) (see protein)
    34% identity, 76% coverage of query (224 bits)

3nvdA Structure of ybbd in complex with pugnac
    34% identity, 76% coverage of query (224 bits)

3bmxA Beta-n-hexosaminidase (ybbd) from bacillus subtilis
    34% identity, 76% coverage of query (224 bits)

4gyjA / P40406 Crystal structure of mutant (d318n) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group p1) (see paper)
    34% identity, 76% coverage of query (222 bits)

CAB94620.1 β-N-acetylglucosaminidase (DasD;SCO5235) (EC 3.2.1.52) (see protein)
    37% identity, 74% coverage of query (190 bits)

5vqeA / A0A2R2JFS5 Beta-glucoside phosphorylase bglx bound to 2fglc (see paper)
    30% identity, 72% coverage of query (157 bits)

Build an alignment

Build an alignment for Synpcc7942_0354 and 6 homologs with ≥ 30% identity

Select sequences

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory