Searching for up to 100 curated homologs for Synpcc7942_0445 FitnessBrowser__SynE:Synpcc7942_0445 (351 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 3.A.1.5.12 / Q9X0F5 TM1065, component of Probable rhamnose oligosaccharide porter. Induced by rhamnose (see paper)
    41% identity, 94% coverage of query (257 bits)

TC 3.A.1.5.29 / Q9WXR5 ABC-type transporter, integral membrane subunit, component of Probable xylan oligosaccharide porter (Conners et al. 2005). Induced by cylan and xylose. Regulated by xylose-responsive regulator XylR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
    41% identity, 96% coverage of query (228 bits)

SM_b21645 ABC transporter for D-Raffinose, permease component 1 from Sinorhizobium meliloti 1021
    38% identity, 97% coverage of query (222 bits)

TC 3.A.1.5.18 / O51310 OppC1, component of The oligopeptide transporter OppA1-5, B1, C1, DF (functions with five binding proteins of differing induction properties and peptide specificities; OppA1-3 are chromosomally encoded; OppA4 and 5 are plasmid encoded.) from Borrelia burgdorferi (Lyme disease spirochete) (see paper)
    30% identity, 99% coverage of query (180 bits)

Build an alignment

Build an alignment for Synpcc7942_0445 and 4 homologs with ≥ 30% identity

Or download the sequences

No additional hits (below 30% identity) were found

Or start over