Searching for up to 100 curated homologs for Synpcc7942_1653 FitnessBrowser__SynE:Synpcc7942_1653 (398 a.a.)
Found high-coverage hits (≥70%) to 34 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
GldA / b3945 L-1,2-propanediol dehydrogenase / glycerol dehydrogenase (EC 1.1.1.75; EC 1.1.1.6) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
gldA / P0A9S5 L-1,2-propanediol dehydrogenase / glycerol dehydrogenase (EC 1.1.1.75; EC 1.1.1.6) from Escherichia coli (strain K12) (see 25 papers)
GLDA_ECOLI / P0A9S5 Glycerol dehydrogenase; GDH; GLDH; (R)-aminopropanol dehydrogenase; 1,2-propanediol dehydrogenase; D-1-amino-2-propanol oxidoreductase; EC 1.1.1.6; EC 1.1.1.75 from Escherichia coli (strain K12) (see 8 papers)
P0A9S5 glycerol dehydrogenase (EC 1.1.1.6) from Escherichia coli (see paper)
8goaA / P0A9S5 Crystal structure of glycerol dehydrogenase in the absence of NAD+ (see paper)
gldA / RF|NP_418380 glycerol dehydrogenase; EC 1.1.1.6 from Escherichia coli K12 (see 8 papers)
44% identity, 90% coverage of query (263 bits)
A0MLR7 glycerol dehydrogenase (EC 1.1.1.6) from Klebsiella pneumoniae (see paper)
44% identity, 90% coverage of query (263 bits)
8gobA Crystal structure of glycerol dehydrogenase in the presence of NAD+
44% identity, 90% coverage of query (263 bits)
5zxlA Structure of glda from e.Coli
44% identity, 90% coverage of query (263 bits)
A6TGD6 glycerol dehydrogenase (EC 1.1.1.6) from Klebsiella pneumoniae subsp. pneumoniae (see paper)
43% identity, 90% coverage of query (261 bits)
B2ZPN8 glycerol dehydrogenase (EC 1.1.1.6) from Klebsiella pneumoniae (see 3 papers)
43% identity, 90% coverage of query (261 bits)
Q8ZKM9 glycerol dehydrogenase (EC 1.1.1.6) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
42% identity, 90% coverage of query (258 bits)
4mcaA Crystal structure of glycerol dehydrogenase from serratia to 1.9a
41% identity, 91% coverage of query (253 bits)
1kq3A / Q9WYQ4 Crystal structure of a glycerol dehydrogenase (tm0423) from thermotoga maritima at 1.5 a resolution (see paper)
41% identity, 89% coverage of query (252 bits)
GLDA_THEMA / Q9WYQ4 Glycerol dehydrogenase; GDH; GLDH; EC 1.1.1.6 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
Q9WYQ4 glycerol dehydrogenase (EC 1.1.1.6) from Thermotoga maritima (see 2 papers)
41% identity, 89% coverage of query (251 bits)
GLDA_CITFR / P45511 Glycerol dehydrogenase; GDH; GLDH; EC 1.1.1.6 from Citrobacter freundii (see paper)
dhaD / GB|AAB48844.1 glycerol dehydrogenase; EC 1.1.1.6 from Citrobacter freundii (see paper)
dhaD / AAB48844.1 glycerol dehydrogenase from Citrobacter freundii (see 4 papers)
41% identity, 90% coverage of query (246 bits)
GLDA_GEOSE / P32816 Glycerol dehydrogenase; GDH; GLDH; GlyDH; EC 1.1.1.6 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see 2 papers)
P32816 glycerol dehydrogenase (EC 1.1.1.6) from Geobacillus stearothermophilus (see paper)
gldA / GI|142978 glycerol dehydrogenase; EC 1.1.1.6 from Geobacillus stearothermophilus (see 4 papers)
39% identity, 92% coverage of query (245 bits)
1jq5A / P32816 Bacillus stearothermophilus glycerol dehydrogenase complex with NAD+ (see paper)
39% identity, 92% coverage of query (244 bits)
A0A150JSL8 glycerol dehydrogenase (EC 1.1.1.6) from Weizmannia coagulans (see paper)
39% identity, 91% coverage of query (238 bits)
Q9HHR2 glycolaldehyde reductase (EC 1.1.1.77) from Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (see paper)
37% identity, 91% coverage of query (234 bits)
1jqaA Bacillus stearothermophilus glycerol dehydrogenase complex with glycerol
39% identity, 92% coverage of query (234 bits)
5xn8A Structure of glycerol dehydrogenase crystallised as a contaminant
41% identity, 90% coverage of query (231 bits)
A0A1D3TV18 glycerol dehydrogenase (EC 1.1.1.6) from Anaerobium acetethylicum (see paper)
37% identity, 90% coverage of query (225 bits)
A0A0H3J8E1 glycerol dehydrogenase (EC 1.1.1.6) from Clostridium pasteurianum (see paper)
35% identity, 91% coverage of query (223 bits)
1ta9B / O13702 Crystal structure of glycerol dehydrogenase from schizosaccharomyces pombe
35% identity, 92% coverage of query (217 bits)
GLD1_SCHPO / O13702 Glycerol dehydrogenase 1; GDH; GLDH; EC 1.1.1.6 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 2 papers)
O13702 glycerol dehydrogenase (EC 1.1.1.6) from Schizosaccharomyces pombe (see paper)
gld1 / RF|NP_593651.1 mitochondrial glycerol dehydrogenase Gld1 from Schizosaccharomyces pombe (see 2 papers)
35% identity, 92% coverage of query (217 bits)
bedD / GB|AAC44426.1 glycerol dehydrogenase; EC 1.1.1.6 from Pseudomonas putida (see paper)
gldA / AAC44426.1 GldA from Pseudomonas putida (see 3 papers)
41% identity, 90% coverage of query (214 bits)
3uhjA / Q92MR2 Crystal structure of a probable glycerol dehydrogenase from sinorhizobium meliloti 1021
37% identity, 88% coverage of query (197 bits)
Build an alignment for Synpcc7942_1653 and 23 homologs with ≥ 30% identity
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HcxA / b0599 hydroxycarboxylate dehydrogenase A from Escherichia coli K-12 substr. MG1655 (see 4 papers)
HCXA_ECOLI / P45579 Hydroxycarboxylate dehydrogenase A; 2-oxobutanoate reductase; 2-oxoglutarate reductase; EC 1.1.1.- from Escherichia coli (strain K12) (see paper)
27% identity, 89% coverage of query (122 bits)
egsA / Q9YER2 glycerol-1-phosphate dehydrogenase monomer (EC 1.1.1.261) from Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) (see 2 papers)
G1PDH_AERPE / Q9YER2 Glycerol-1-phosphate dehydrogenase [NAD(P)+]; G1P dehydrogenase; G1PDH; Gro1PDH; Enantiomeric glycerophosphate synthase; sn-glycerol-1-phosphate dehydrogenase; EC 1.1.1.261 from Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) (see 2 papers)
25% identity, 80% coverage of query (68.6 bits)
3ce9A / Q97IL4 Crystal structure of glycerol dehydrogenase (np_348253.1) from clostridium acetobutylicum at 2.37 a resolution
22% identity, 81% coverage of query (65.1 bits)
I3DTP7 methanol dehydrogenase (EC 1.1.1.244) from Bacillus methanolicus (see paper)
24% identity, 75% coverage of query (62.4 bits)
mdh / P31005 NAD-dependent methanol dehydrogenase monomer (EC 1.1.1.244) from Bacillus methanolicus (see paper)
MEDH_BACMT / P31005 NAD-dependent methanol dehydrogenase; MDH; MEDH; Type 3 alcohol dehydrogenase; EC 1.1.1.244 from Bacillus methanolicus (see 6 papers)
P31005 methanol dehydrogenase (EC 1.1.1.244) from Bacillus methanolicus (see paper)
mdh methanol dehydrogenase; EC 1.1.1.244 from Bacillus methanolicus (see paper)
25% identity, 72% coverage of query (60.5 bits)
I3DX19 methanol dehydrogenase (EC 1.1.1.244) from Bacillus methanolicus (see paper)
23% identity, 75% coverage of query (56.6 bits)
DHAT_CITFR / P45513 1,3-propanediol dehydrogenase; 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase; EC 1.1.1.202 from Citrobacter freundii (see paper)
P45513 1,3-propanediol dehydrogenase (EC 1.1.1.202) from Citrobacter freundii (see paper)
dhaT / GB|AAB48848.1 1,3-propanediol dehydrogenase; EC 1.1.1.202 from Citrobacter freundii (see paper)
dhaT / AAB48848.1 1,3-propanediol dehydrogenase from Citrobacter freundii (see 4 papers)
25% identity, 85% coverage of query (56.2 bits)
3bfjA / Q7WRJ3 Crystal structure analysis of 1,3-propanediol oxidoreductase (see paper)
23% identity, 85% coverage of query (53.9 bits)
egsA / P72010 glycerol-1-phosphate dehydrogenase monomer (EC 1.1.1.261) from Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (see 4 papers)
G1PDH_METTH / P72010 Glycerol-1-phosphate dehydrogenase [NAD(P)+]; G1P dehydrogenase; G1PDH; Enantiomeric glycerophosphate synthase; sn-glycerol-1-phosphate dehydrogenase; EC 1.1.1.261 from Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum) (see 3 papers)
23% identity, 79% coverage of query (50.4 bits)
Q59477 1,3-propanediol dehydrogenase (EC 1.1.1.202) from Klebsiella pneumoniae (see 2 papers)
22% identity, 85% coverage of query (49.7 bits)
Q7WRJ3 1,3-propanediol dehydrogenase (EC 1.1.1.202) from Klebsiella pneumoniae (see 3 papers)
22% identity, 85% coverage of query (49.3 bits)
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Lawrence Berkeley National Laboratory