Sites on a Tree

 

Searching for up to 100 curated homologs for Synpcc7942_1915 FitnessBrowser__SynE:Synpcc7942_1915 (130 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

1dbfA / P19080 Chorismate mutase from bacillus subtilis at 1.30 angstrom (see paper)
    42% identity, 95% coverage of query (103 bits)

AROH_BACSU / P19080 Chorismate mutase AroH; CM; EC 5.4.99.5 from Bacillus subtilis (strain 168) (see 5 papers)
    41% identity, 95% coverage of query (102 bits)

3zp7A Arg90cit chorismate mutase of bacillus subtilis in complex with chorismate and prephenate
    41% identity, 88% coverage of query (97.8 bits)

2chtA Crystal structures of the monofunctional chorismate mutase from bacillus subtilis and its complex with a transition state analog
    41% identity, 87% coverage of query (93.6 bits)

1comA The monofunctional chorismate mutase from bacillus subtilis: structure determination of chorismate mutase and its complexes with a transition state analog and prephenate, and implications on the mechanism of enzymatic reaction
    41% identity, 87% coverage of query (93.6 bits)

AROH_THETH / Q84FH6 Chorismate mutase AroH; EC 5.4.99.5 from Thermus thermophilus (see paper)
Q84FH6 chorismate mutase (EC 5.4.99.5) from Thermus thermophilus (see paper)
    44% identity, 89% coverage of query (84.3 bits)

Build an alignment

Build an alignment for Synpcc7942_1915 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory