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Searching for up to 100 curated homologs for Synpcc7942_2035 FitnessBrowser__SynE:Synpcc7942_2035 (345 a.a.)

Found high-coverage hits (≥70%) to 29 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

7szeB / C3RVP5 Structure of the rieske non-heme iron oxygenase gxta with saxitoxin bound (see paper)
    33% identity, 93% coverage of query (144 bits)

7szfA Structure of the rieske non-heme iron oxygenase gxta with beta- saxitoxinol bound
    33% identity, 93% coverage of query (136 bits)

6wndA Structure of the rieske non-heme iron oxygenase gxta with dideoxysaxitoxin bound
    33% identity, 93% coverage of query (136 bits)

7szgA Structure of the rieske non-heme iron oxygenase gxta pressurized with xenon
    33% identity, 93% coverage of query (136 bits)

6icqA Pseudomonas putida cbb5 ndma ql mutant with theobromine
    30% identity, 94% coverage of query (132 bits)

ndmA / H9N289 methylxanthine N1-demethylase NdmA component (EC 1.14.13.178) from Pseudomonas putida (see paper)
NDMA_PSEPU / H9N289 Methylxanthine N1-demethylase NdmA; 1-methylxanthine demethylase; EC 1.14.13.178 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
H9N289 methylxanthine N1-demethylase (EC 1.14.13.178) from Pseudomonas putida (see 2 papers)
    30% identity, 94% coverage of query (129 bits)

6icnA / H9N289 Pseudomonas putida cbb5 ndma with caffeine (see paper)
    30% identity, 94% coverage of query (129 bits)

Build an alignment

Build an alignment for Synpcc7942_2035 and 7 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

6ickA Pseudomonas putida cbb5 ndma
    29% identity, 94% coverage of query (129 bits)

6icoA Pseudomonas putida cbb5 ndma with theophylline
    30% identity, 94% coverage of query (129 bits)

6wnbA Structure of the rieske non-heme iron oxygenase sxtt with dideoxysaxitoxin bound
    30% identity, 93% coverage of query (128 bits)

TSAM2_COMTE / Q9AHG3 Putative toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM2; Toluenesulfonate methyl-monooxygenase oxygenase component TsaM2; EC 1.14.14.- from Comamonas testosteroni (Pseudomonas testosteroni)
    28% identity, 90% coverage of query (125 bits)

7szhA Structure of the rieske non-heme iron oxygenase sxtt with beta- saxitoxinol bound
    31% identity, 93% coverage of query (125 bits)

6wn3B / C3RVQ0 Structure of the rieske non-heme iron oxygenase sxtt (see paper)
    31% identity, 93% coverage of query (124 bits)

tsaM / P94679 TsaM from Comamonas testosteroni (see paper)
TSAM1_COMTE / P94679 Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1; TS methylmonooxygenase system, oxygenase M; Toluenesulfonate methyl-monooxygenase oxygenase component TsaM1; EC 1.14.14.- from Comamonas testosteroni (Pseudomonas testosteroni) (see paper)
    28% identity, 90% coverage of query (122 bits)

sdmA / Q60A55 4,4-dimethylsterol methyl4β-monooxygenase (EC 1.14.13.246) from Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) (see 2 papers)
SDMA_METCA / Q60A55 4beta-methylsterol monooxygenase; Sterol demethylase protein A; EC 1.14.13.246 from Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) (see paper)
    33% identity, 74% coverage of query (122 bits)

Q2KQ82 vanillate monooxygenase (EC 1.14.13.82) from Comamonas testosteroni (see paper)
vanA / AAW33713.1 VanA from Comamonas testosteroni (see paper)
    28% identity, 94% coverage of query (121 bits)

ndmB / H9N290 methylxanthine N3-demethylase NdmB component (EC 1.14.13.179) from Pseudomonas putida (see paper)
NDMB_PSEPU / H9N290 Methylxanthine N3-demethylase NdmB; 3-methylxanthine demethylase; EC 1.14.13.179 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
H9N290 methylxanthine N3-demethylase (EC 1.14.13.179) from Pseudomonas putida (see 2 papers)
    29% identity, 92% coverage of query (120 bits)

6iclA / H9N290 Pseudomonas putida cbb5 ndmb (see paper)
    29% identity, 92% coverage of query (118 bits)

vanA / O05616 vanillate O-demethylase oxygenase component (EC 1.14.13.82) from Pseudomonas sp. (strain HR199 / DSM 7063) (see paper)
    27% identity, 93% coverage of query (113 bits)

Q2KQ79 vanillate monooxygenase (EC 1.14.13.82) from Comamonas testosteroni (see paper)
ivaA / AAW33716.1 IvaA from Comamonas testosteroni (see paper)
    27% identity, 94% coverage of query (110 bits)

CAO / Q9MBA1 chlorophyllide a oxygenase (EC 1.14.13.122) from Arabidopsis thaliana (see 6 papers)
CAO_ARATH / Q9MBA1 Chlorophyllide a oxygenase, chloroplastic; Chlorophyll a oxygenase; Chlorophyll b synthase; AtCAO; EC 1.14.13.122 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
Q9MBA1 chlorophyllide-a oxygenase (EC 1.14.13.122) from Arabidopsis thaliana (see 3 papers)
    26% identity, 94% coverage of query (99.0 bits)

CAO_ORYSJ / Q8S7E1 Chlorophyllide a oxygenase, chloroplastic; Chlorophyll a oxygenase; Chlorophyll b synthase; EC 1.14.13.122 from Oryza sativa subsp. japonica (Rice)
Q8S7E1 chlorophyllide-a oxygenase (EC 1.14.13.122) from Oryza sativa Japonica Group (see paper)
    26% identity, 94% coverage of query (94.7 bits)

cndA / A0A059WLZ7 chloroacetanilide N-alkylformylase (EC 1.14.15.23) from Rhizorhabdus wittichii (strain DC-6 / KACC 16600) (see paper)
CNDA_RHIWD / A0A059WLZ7 Chloroacetanilide N-alkylformylase, oxygenase component; Three-component Rieske non-heme iron oxygenase system; RHO; EC 1.14.15.23 from Rhizorhabdus wittichii (strain DC-6 / KACC 16600) (Sphingomonas wittichii) (see paper)
A0A059WLZ7 chloroacetanilide N-alkylformylase (EC 1.14.15.23) from Rhizorhabdus wittichii (see paper)
    29% identity, 86% coverage of query (92.8 bits)

I1X0L7 chlorophyllide-a oxygenase (EC 1.14.13.122) from Hordeum vulgare (see paper)
    26% identity, 94% coverage of query (92.8 bits)

Q9XJ38 chlorophyllide-a oxygenase (EC 1.14.13.122) from Dunaliella salina (see paper)
    27% identity, 91% coverage of query (91.3 bits)

PAO_ORYSJ / Q0DV66 Pheophorbide a oxygenase, chloroplastic; OsPaO; Pheide a oxygenase; EC 1.14.15.17 from Oryza sativa subsp. japonica (Rice) (see paper)
    27% identity, 76% coverage of query (88.6 bits)

PAO / Q9FYC2 pheophorbide a oxygenase from Arabidopsis thaliana (see 4 papers)
PAO_ARATH / Q9FYC2 Pheophorbide a oxygenase, chloroplastic; AtPaO; Pheide a oxygenase; Accelerated cell death 1; Lethal leaf-spot 1 homolog; Lls1; EC 1.14.15.17 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
Q9FYC2 pheophorbide a oxygenase (EC 1.14.15.17) from Arabidopsis thaliana (see 3 papers)
    27% identity, 76% coverage of query (75.9 bits)

Q0ZKW4 pheophorbide a oxygenase (EC 1.14.15.17) from Brassica napus (see paper)
    27% identity, 76% coverage of query (74.7 bits)

Q0ZKW3 pheophorbide a oxygenase (EC 1.14.15.17) from Brassica napus (see paper)
    26% identity, 76% coverage of query (73.9 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory