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Searching for up to 100 curated homologs for Synpcc7942_2043 FitnessBrowser__SynE:Synpcc7942_2043 (139 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

SPEH_THEMA / Q9WZC3 S-adenosylmethionine decarboxylase proenzyme; AdoMetDC; SAMDC; EC 4.1.1.50 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
Q9WZC3 adenosylmethionine decarboxylase (EC 4.1.1.50) from Thermotoga maritima (see 2 papers)
speH / PDB|1TLU_A adenosylmethionine decarboxylase from Thermotoga maritima (see paper)
    43% identity, 72% coverage of query (104 bits)

speD / PDB|1TMI_A adenosylmethionine decarboxylase from Thermotoga maritima (see paper)
    42% identity, 72% coverage of query (102 bits)

speD / GI|2293278 adenosylmethionine decarboxylase; EC 4.1.1.50 from Bacillus subtilis (see paper)
    41% identity, 72% coverage of query (97.4 bits)

SPEH_BACSU / O34426 S-adenosylmethionine decarboxylase proenzyme; AdoMetDC; SAMDC; EC 4.1.1.50 from Bacillus subtilis (strain 168) (see paper)
    41% identity, 72% coverage of query (97.4 bits)

SPEH_SACS2 / Q9UWY8 S-adenosylmethionine decarboxylase proenzyme; AdoMetDC; SAMDC; EC 4.1.1.50 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 2 papers)
Q9UWY8 adenosylmethionine decarboxylase (EC 4.1.1.50) from Saccharolobus solfataricus (see paper)
    33% identity, 78% coverage of query (77.4 bits)

ARGDC_SACS2 / Q9UWU1 Arginine decarboxylase proenzyme; ADC; ArgDC; Pyruvoyl-dependent arginine decarboxylase; EC 4.1.1.19 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see paper)
Q9UWU1 arginine decarboxylase (EC 4.1.1.19) from Saccharolobus solfataricus (see paper)
    33% identity, 75% coverage of query (76.3 bits)

Build an alignment

Build an alignment for Synpcc7942_2043 and 6 homologs with ≥ 30% identity

Select sequences

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory