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Searching for up to 100 curated homologs for WP_004117842.1 NCBI__GCF_000359745.1:WP_004117842.1 (308 a.a.)

Found high-coverage hits (≥70%) to 52 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

7p7wBBB / Q12306,R8APY9 7p7wBBB
    35% identity, 97% coverage of query (150 bits)

7p9pAAA Ubiquitin-like protein SMT3,N-acetyl-D-glucosamine kinase
    35% identity, 97% coverage of query (150 bits)

7p9lAAA Ubiquitin-like protein SMT3,N-acetyl-D-glucosamine kinase
    35% identity, 97% coverage of query (150 bits)

YcfX / b1119 N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli K-12 substr. MG1655 (see 8 papers)
nagK / P75959 N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli (strain K12) (see 6 papers)
NAGK_ECOLI / P75959 N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Escherichia coli (strain K12) (see 2 papers)
nagK / GB|ABB62126.1 N-acetyl-D-glucosamine kinase; EC 2.7.1.59 from Escherichia coli K12 (see 5 papers)
    33% identity, 97% coverage of query (146 bits)

4db3A / Q8D9M7 1.95 angstrom resolution crystal structure of n-acetyl-d-glucosamine kinase from vibrio vulnificus.
    31% identity, 97% coverage of query (145 bits)

agaK / A0KYQ6 N-acetylgalactosamine kinase from Shewanella sp. (strain ANA-3) (see paper)
AGAK_SHESA / A0KYQ6 N-acetylgalactosamine kinase AgaK; GalNAc kinase; N-acetylglucosamine kinase; GlcNAc kinase; EC 2.7.1.-; EC 2.7.1.59 from Shewanella sp. (strain ANA-3) (see paper)
    36% identity, 96% coverage of query (143 bits)

Mak / b0394 fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli K-12 substr. MG1655 (see 10 papers)
mak / P23917 fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli (strain K12) (see 8 papers)
MAK_ECOLI / P23917 Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli (strain K12) (see 2 papers)
    31% identity, 97% coverage of query (134 bits)

Sama_2231 glucokinase (EC 2.7.1.2) from Shewanella amazonensis SB2B
    35% identity, 96% coverage of query (122 bits)

SMc03109 Mannokinase (EC 2.7.1.7) from Sinorhizobium meliloti 1021
    30% identity, 96% coverage of query (119 bits)

NAGK_SALTY / Q8ZPZ9 N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    32% identity, 97% coverage of query (117 bits)

2ap1A / Q8ZPZ9 Crystal structure of the putative regulatory protein
    32% identity, 97% coverage of query (117 bits)

Sama_1405 glucokinase (EC 2.7.1.2) from Shewanella amazonensis SB2B
    31% identity, 95% coverage of query (104 bits)

Build an alignment

Build an alignment for WP_004117842.1 and 12 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

Q8R8N4 ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus subsp. tengcongensis (see paper)
    26% identity, 96% coverage of query (87.4 bits)

NanR / VIMSS3720738 NanR regulator of Sialic acid utilization; N-acetylglucosamine utilization, effector N-acetylglucosamine; N-acetylneuraminic acid (repressor) from Bacteroides vulgatus ATCC 8482
    25% identity, 95% coverage of query (82.4 bits)

BGLK_LISMO / Q8Y3R9 Beta-glucoside kinase; EC 2.7.1.85 from Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (see paper)
    28% identity, 99% coverage of query (79.0 bits)

2qm1B / Q830J4 Crystal structure of glucokinase from enterococcus faecalis
    30% identity, 98% coverage of query (78.2 bits)

NanR / VIMSS6110394 NanR regulator of Sialic acid utilization; N-acetylglucosamine utilization, effector N-acetylglucosamine; N-acetylneuraminic acid (repressor) from Bacteroides plebeius DSM 17135
    27% identity, 77% coverage of query (77.8 bits)

BGLK_LISIN / Q926Y3 Beta-glucoside kinase; EC 2.7.1.85 from Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) (see paper)
    28% identity, 99% coverage of query (76.3 bits)

BGLK_KLEPN / Q93LQ8 Beta-glucoside kinase; EC 2.7.1.85 from Klebsiella pneumoniae (see paper)
    26% identity, 86% coverage of query (75.9 bits)

glk / Q8DVE8 glucokinase subunit (EC 2.7.1.1) from Streptococcus mutans serotype c (strain ATCC 700610 / UA159) (see paper)
    28% identity, 98% coverage of query (73.9 bits)

6jdbA / Q4QP43 Crystal structure of n-acetyl mannosmaine kinase in complex with mannac-6p and adp from haemophilus influenzae
    27% identity, 95% coverage of query (71.2 bits)

XylR / Q9WXW5_THEMA Transcription factor XylR (repressor) from Thermotoga maritima MSB8
    25% identity, 96% coverage of query (68.6 bits)

XylR / VIMSS10362834 XylR regulator of Xylose utilization, effector Xylose; Glucose (repressor) from Thermotoga naphthophila RKU-10
    24% identity, 96% coverage of query (68.6 bits)

glkA / CAA62003.1 glucokinase from Renibacterium salmoninarum (see 2 papers)
    30% identity, 96% coverage of query (66.6 bits)

glk / Q9X1I0 glucokinase subunit (EC 2.7.1.1) from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
GLK_THEMA / Q9X1I0 Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
    27% identity, 95% coverage of query (65.9 bits)

XylR / VIMSS6926953 XylR regulator of Xylose utilization, effector Xylose (repressor) from Paenibacillus sp. JDR-2
    25% identity, 88% coverage of query (65.1 bits)

GLK_STRCO / P0A4E1 Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see paper)
P0A4E1 glucokinase (EC 2.7.1.2) from Streptomyces coelicolor (see paper)
glkA glucokinase; EC 2.7.1.2 from Streptomyces coelicolor (see 2 papers)
    29% identity, 96% coverage of query (65.1 bits)

NanR / VIMSS6257414 NanR regulator of Sialic acid utilization; N-acetylglucosamine utilization, effector N-acetylglucosamine; N-acetylneuraminic acid (repressor) from Bacteroides eggerthii DSM 20697
    23% identity, 94% coverage of query (64.3 bits)

6jdcA / Q4QP43 Crystal structure of n-acetyl mannosmaine kinase in complex with mannac from haemophilus influenzae
    27% identity, 95% coverage of query (62.0 bits)

1z05A / Q9KQJ1 Crystal structure of the rok family transcriptional regulator, homolog of e.Coli mlc protein.
    23% identity, 79% coverage of query (61.6 bits)

NagC / VIMSS2859304 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Psychromonas sp. CNPT3
    24% identity, 81% coverage of query (61.2 bits)

NagC / VIMSS7700176 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Tolumonas auensis DSM 9187
    25% identity, 73% coverage of query (60.5 bits)

6jdhA Crystal structure of n-acetyl mannosmaine kinase from pasteurella multocida
    25% identity, 95% coverage of query (60.1 bits)

CA265_RS11300 N-acetylglucosamine kinase (EC 2.7.1.59) from Pedobacter sp. GW460-11-11-14-LB5
    20% identity, 95% coverage of query (60.1 bits)

6jdoA Crystal structure of n-acetyl mannosmaine kinase with amp-pnp from pasteurella multocida
    25% identity, 95% coverage of query (60.1 bits)

NagC / VIMSS4630820 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Moritella sp. PE36
    24% identity, 76% coverage of query (58.9 bits)

XylR / VIMSS854293 XylR regulator of Xylose utilization, effector Xylose (repressor) from Geobacillus kaustophilus HTA426
    25% identity, 95% coverage of query (57.8 bits)

XylR / VIMSS3676564 XylR regulator of Xylose utilization, effector Xylose; Glucose (repressor) from Thermotoga lettingae TMO
    25% identity, 96% coverage of query (57.8 bits)

Q8RDN7 N-acylmannosamine kinase (EC 2.7.1.60) from Fusobacterium nucleatum subsp. nucleatum (see paper)
    28% identity, 71% coverage of query (57.8 bits)

3vgkB / B1VZT1 Crystal structure of a rok family glucokinase from streptomyces griseus (see paper)
    27% identity, 97% coverage of query (57.8 bits)

3vglA Crystal structure of a rok family glucokinase from streptomyces griseus in complex with glucose and amppnp
    27% identity, 97% coverage of query (57.8 bits)

B1VZT1 glucokinase (EC 2.7.1.2) from Streptomyces griseus (see 2 papers)
    27% identity, 97% coverage of query (57.4 bits)

NagC / VIMSS3566654 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Aeromonas salmonicida subsp. salmonicida A449
    23% identity, 78% coverage of query (57.0 bits)

3vovB / Q5SLJ4 Crystal structure of rok hexokinase from thermus thermophilus (see paper)
    30% identity, 79% coverage of query (56.6 bits)

5f7rA Rok repressor lmo0178 from listeria monocytogenes bound to inducer
    23% identity, 77% coverage of query (54.7 bits)

NagC / VIMSS1972937 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (repressor) from Psychromonas ingrahamii 37
    22% identity, 79% coverage of query (53.5 bits)

NagC / b0676 DNA-binding transcriptional dual regulator NagC from Escherichia coli K-12 substr. MG1655 (see 14 papers)
NAGC_ECOLI / P0AF20 N-acetylglucosamine repressor from Escherichia coli (strain K12) (see paper)
NagC / P0AF20 Transcription factor NagC (activator/repressor) from Escherichia coli K12 MG1655 (see 3 papers)
nagC / SP|P0AF20 N-acetylglucosamine repressor from Escherichia coli K12 (see paper)
    22% identity, 77% coverage of query (52.8 bits)

NagC / VIMSS548778 NagC regulator of N-acetylglucosamine utilization, effector N-acetylglucosamine-6-phosphate (activator/repressor) from Photorhabdus luminescens TTO1
    22% identity, 77% coverage of query (51.6 bits)

YjcT / b4084 D-allose kinase (EC 2.7.1.55) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
alsK / P32718 D-allose kinase (EC 2.7.1.55) from Escherichia coli (strain K12) (see 4 papers)
ALSK_ECOLI / P32718 D-allose kinase; Allokinase; EC 2.7.1.55 from Escherichia coli (strain K12) (see 2 papers)
alsK / RF|NP_418508 D-allose kinase; EC 2.7.1.55 from Escherichia coli K12 (see 6 papers)
    24% identity, 74% coverage of query (47.8 bits)

YhcI / b3222 N-acetylmannosamine kinase (EC 2.7.1.60) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
nanK / P45425 N-acetylmannosamine kinase (EC 2.7.1.60) from Escherichia coli (strain K12) (see 5 papers)
NANK_ECOLI / P45425 N-acetylmannosamine kinase; ManNAc kinase; N-acetyl-D-mannosamine kinase; EC 2.7.1.60 from Escherichia coli (strain K12) (see 3 papers)
    28% identity, 85% coverage of query (47.4 bits)

2aa4A / P45425 Crystal structure of escherichia coli putative n-acetylmannosamine kinase, new york structural genomics consortium
    28% identity, 85% coverage of query (47.4 bits)

Gne / O35826 bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase subunit (EC 2.7.1.60; EC 3.2.1.183) from Rattus norvegicus (see paper)
GLCNE_RAT / O35826 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; UDP-GlcNAc-2-epimerase/ManAc kinase; EC 3.2.1.183; EC 2.7.1.60 from Rattus norvegicus (Rat) (see 5 papers)
    24% identity, 99% coverage of query (44.3 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory