Sites on a Tree

 

Searching for up to 100 curated homologs for WP_005454202.1 NCBI__GCF_000244975.1:WP_005454202.1 (99 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

gatC / O06492 glutamyl-tRNAGln amidotransferase subunit C (EC 6.3.5.7) from Bacillus subtilis (strain 168) (see paper)
    44% identity, 96% coverage of query (87.8 bits)

GATC_STRP6 / Q5XAC6 Glutamyl-tRNA(Gln) amidotransferase subunit C; Glu-ADT subunit C; EC 6.3.5.- from Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
    30% identity, 93% coverage of query (51.6 bits)

Build an alignment

Build an alignment for WP_005454202.1 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

3al0C / Q9WY94,Q9X2I8 Crystal structure of the glutamine transamidosome from thermotoga maritima in the glutamylation state. (see paper)
    27% identity, 92% coverage of query (42.4 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory