Sites on a Tree

 

Searching for up to 100 curated homologs for WP_006747168.1 NCBI__GCF_000227685.2:WP_006747168.1 (352 a.a.)

Found high-coverage hits (≥70%) to 37 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AroG / b0754 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli K-12 substr. MG1655 (see 20 papers)
aroG / P0AB91 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli (strain K12) (see 17 papers)
C3TIE2 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Escherichia coli (see 3 papers)
1kflA / P0AB91 Crystal structure of phenylalanine-regulated 3-deoxy-d-arabino- heptulosonate-7-phosphate synthase (dahp synthase) from e.Coli complexed with mn2+, pep, and phe (see paper)
    62% identity, 99% coverage of query (456 bits)

P0AB91 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase; EC 2.5.1.54 from Escherichia coli (strain K12)
    62% identity, 99% coverage of query (456 bits)

5cksB Dahp (3-deoxy-d-arabinoheptulosonate-7-phosphate) synthase in complex with dahp oxime.
    63% identity, 98% coverage of query (451 bits)

8e0sD Dahp (3-deoxy-d-arabinoheptulosonate-7-phosphate) synthase complexed with dahp oxime in unbound:(bound)2:unbound conformations
    62% identity, 97% coverage of query (449 bits)

7rudB Dahp synthase complex with trifluoropyruvate oxime
    62% identity, 97% coverage of query (449 bits)

Q9K169 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Neisseria meningitidis (see 3 papers)
    61% identity, 99% coverage of query (444 bits)

1gg1A Crystal structure analysis of dahp synthase in complex with mn2+ and 2-phosphoglycolate
    62% identity, 97% coverage of query (442 bits)

5dcbC / Q9K169 Neisseria meningitidis 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase regulated and complexed with pep
    61% identity, 98% coverage of query (441 bits)

5dcdA Neisseria meningitidis 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase regulated (tyrosine)
    61% identity, 98% coverage of query (441 bits)

5dceA Neisseria meningitidis 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase regulated (tryptophan)
    62% identity, 98% coverage of query (441 bits)

4hsoA Crystal structure of s213g variant dah7ps from neisseria meningitidis
    61% identity, 98% coverage of query (439 bits)

1qr7A Crystal structure of phenylalanine-regulated 3-deoxy-d-arabino- heptulosonate-7-phosphate synthase from escherichia coli complexed with pb2+ and pep
    62% identity, 97% coverage of query (437 bits)

7rueA Dahp synthase complexed with trifluoropyruvate semicarbazone
    61% identity, 98% coverage of query (435 bits)

5cksA Dahp (3-deoxy-d-arabinoheptulosonate-7-phosphate) synthase in complex with dahp oxime.
    61% identity, 98% coverage of query (432 bits)

4umcA Structural analysis of substrate-mimicking inhibitors in complex with neisseria meningitidis 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase - the importance of accommodating the active site water
    62% identity, 95% coverage of query (429 bits)

4umbA Structural analysis of substrate-mimicking inhibitors in complex with neisseria meningitidis 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase - the importance of accommodating the active site water
    62% identity, 95% coverage of query (429 bits)

4umaA Structural analysis of substrate-mimicking inhibitors in complex with neisseria meningitidis 3 deoxy d arabino heptulosonate 7 phosphate synthase the importance of accommodating the active site water
    62% identity, 95% coverage of query (428 bits)

8e0sA Dahp (3-deoxy-d-arabinoheptulosonate-7-phosphate) synthase complexed with dahp oxime in unbound:(bound)2:unbound conformations
    61% identity, 97% coverage of query (427 bits)

aroG phe-inhibited DAHP synthase; EC 4.1.2.15 from Emericella nidulans (see paper)
    55% identity, 99% coverage of query (390 bits)

2-dehydro-3-deoxyphosphoheptonate aldolase / b1704 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive (EC 2.5.1.54) from Escherichia coli K-12 substr. MG1655 (see 12 papers)
aroH / P00887 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive (EC 2.5.1.54) from Escherichia coli (strain K12) (see 9 papers)
    53% identity, 98% coverage of query (387 bits)

3tqkA / Q5NG89 Structure of phospho-2-dehydro-3-deoxyheptonate aldolase from francisella tularensis schu s4 (see paper)
    55% identity, 92% coverage of query (385 bits)

AMT16_ALTAL / C9K7C8 Phospho-2-dehydro-3-deoxyheptonate aldolase AMT16; AM-toxin biosynthesis protein 16; EC 2.5.1.54 from Alternaria alternata (Alternaria rot fungus) (Torula alternata) (see 3 papers)
    55% identity, 98% coverage of query (384 bits)

AROG_SCHPO / Q9UT09 Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase; EC 2.5.1.54 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    55% identity, 99% coverage of query (384 bits)

aroF putative 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; EC 4.1.2.15 from Emericella nidulans (see paper)
    54% identity, 99% coverage of query (372 bits)

AROF_YEAST / P14843 Phospho-2-dehydro-3-deoxyheptonate aldolase, phenylalanine-inhibited; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase; EC 2.5.1.54 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
    52% identity, 98% coverage of query (371 bits)

1ofoA Crystal structure of the tyrosine regulated 3-deoxy-d-arabino- heptulosonate-7-phosphate synthase from saccharomyces cerevisiae in complex with 2-phosphoglycolate
    54% identity, 98% coverage of query (366 bits)

AROG_YEAST / P32449 Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase; EC 2.5.1.54 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
    53% identity, 98% coverage of query (365 bits)

7reuB / A0A2H0ZNV2 Crystal structure of aro4p, 3-deoxy-d-arabino-heptulosonate-7- phosphate (dahp) synthase from candida auris, l-tyr complex
    50% identity, 99% coverage of query (362 bits)

1of8A Double complex of the tyrosine sensitive dahp synthase from s. Cerevisiae with co2+, pep and the e4p analogoue g3p
    53% identity, 97% coverage of query (362 bits)

1hfbA Crystal structure of the tyrosine-regulated 3-deoxy-d-arabino- heptulosonate-7-phosphate synthase from saccharomyces cerevisiae complexed with phosphoenolpyruvate
    53% identity, 97% coverage of query (360 bits)

1of6A / P32449 Crystal structure of the tyrosine-regulated 3-deoxy-d-arabino- heptulosonate-7-phosphate synthase from saccharomyces cerevisiae complexed with tyrosine and manganese
    53% identity, 98% coverage of query (358 bits)

1ofrC Crystal structure of the tyrosine-regulated 3-deoxy-d-arabino- heptulosonate-7-phosphate synthase from saccharomyces cerevisiae complexed with phenylalanine and manganese
    53% identity, 98% coverage of query (355 bits)

ARO4 / GB|AAB48240.1 phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; EC 2.5.1.54 from Candida albicans (see paper)
    50% identity, 98% coverage of query (354 bits)

AroF / b2601 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive (EC 2.5.1.54) from Escherichia coli K-12 substr. MG1655 (see 14 papers)
aroF / P00888 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive (EC 2.5.1.54) from Escherichia coli (strain K12) (see 11 papers)
P00888 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Escherichia coli (see 2 papers)
    50% identity, 95% coverage of query (344 bits)

P35170 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Corynebacterium glutamicum (see paper)
    51% identity, 96% coverage of query (337 bits)

6agmA / P00888 Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy- d-arabino-heptulosonate-7-phosphate synthase from escherichia coli (see paper)
    48% identity, 95% coverage of query (327 bits)

ARO3 3-Deoxy-D-arabinoheptulosonate-7-phosphate synthase from Candida albicans (see 2 papers)
    59% identity, 74% coverage of query (318 bits)

Build an alignment

Build an alignment for WP_006747168.1 and 37 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory