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Searching for up to 100 curated homologs for WP_008197813.1 NCBI__GCF_000166275.1:WP_008197813.1 (800 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

FADN_BACSU / O32178 Probable 3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35 from Bacillus subtilis (strain 168) (see paper)
    47% identity, 100% coverage of query (701 bits)

Q0KEG0 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator (see paper)
    38% identity, 100% coverage of query (505 bits)

Build an alignment

Build an alignment for WP_008197813.1 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

corN / D7RK19 (3S,5E,8E)-3-hydroxy-5-methyldeca-5,8-dienoyl-[CorL PKS] dehydratase from Corallococcus coralloides (see 2 papers)
    29% identity, 100% coverage of query (345 bits)

D3RXI4 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) from Ferroglobus placidus (see paper)
    25% identity, 79% coverage of query (133 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory