Sites on a Tree

 

Searching for up to 100 curated homologs for WP_010876559.1 NCBI__GCF_000008645.1:WP_010876559.1 (332 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

5t61L 5t61L (see paper)
    45% identity, 98% coverage of query (283 bits)

TC 3.D.8.1.1 / Q59575 FwdF, component of Formyl methanofuran dehydrogenase (FMF-DH) from Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) (see paper)
    44% identity, 98% coverage of query (278 bits)

7bkbK / Q2FKZ4 Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) (see paper)
    33% identity, 98% coverage of query (166 bits)

Build an alignment

Build an alignment for WP_010876559.1 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

TC 3.D.8.1.2 / Q48941 FmdF, component of Formyl methanofuran dehydrogenase (FMF-DH) from Methanosarcina barkeri (see paper)
    28% identity, 91% coverage of query (129 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory