Sites on a Tree

 

Searching for up to 100 curated homologs for WP_010960518.1 NCBI__GCF_000008325.1:WP_010960518.1 (468 a.a.)

Found high-coverage hits (≥70%) to 21 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

8i9iA / P04805 Glutamyl-tRNA synthetase from escherichia coli bound to glutamate and zinc
    61% identity, 100% coverage of query (605 bits)

GltM / b2400 glutamate—tRNA ligase (EC 6.1.1.17) from Escherichia coli K-12 substr. MG1655 (see 39 papers)
gltX / P04805 glutamate—tRNA ligase (EC 6.1.1.17) from Escherichia coli (strain K12) (see 39 papers)
SYE_ECOLI / P04805 Glutamate--tRNA ligase; Glutamyl-tRNA synthetase; GluRS; EC 6.1.1.17 from Escherichia coli (strain K12) (see 9 papers)
gltX / GB|AAC75457.1 glutamyl-tRNA synthetase; EC 6.1.1.17 from Escherichia coli K12 (see 10 papers)
    61% identity, 100% coverage of query (604 bits)

4g6zA / Q2SX36 Crystal structure of a glutamyl-tRNA synthetase glurs from burkholderia thailandensis bound to l-glutamate (see paper)
    56% identity, 77% coverage of query (418 bits)

CCNA_01982 glutamyl-tRNA(Glx) synthetase (EC 6.1.1.24) from Caulobacter crescentus NA1000
    42% identity, 97% coverage of query (343 bits)

SYE_THEVB / Q8DLI5 Glutamate--tRNA ligase; Glutamyl-tRNA synthetase; GluRS; EC 6.1.1.17 from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1) (see paper)
    41% identity, 96% coverage of query (343 bits)

2cfoA / Q8DLI5 Non-discriminating glutamyl-tRNA synthetase from thermosynechococcus elongatus in complex with glu (see paper)
    41% identity, 96% coverage of query (341 bits)

gltX / P22250 glutamyl-tRNAGlx synthetase (EC 6.1.1.17; EC 6.1.1.24) from Bacillus subtilis (strain 168) (see 4 papers)
    37% identity, 97% coverage of query (322 bits)

Q9X2I8 glutamate-tRNAGln ligase (EC 6.1.1.24) from Thermotoga maritima (see paper)
    39% identity, 99% coverage of query (321 bits)

3al0C / Q9WY94,Q9X2I8 Crystal structure of the glutamine transamidosome from thermotoga maritima in the glutamylation state. (see paper)
    39% identity, 99% coverage of query (321 bits)

4griB / O51345 Crystal structure of a glutamyl-tRNA synthetase glurs from borrelia burgdorferi bound to glutamic acid and zinc (see paper)
    35% identity, 99% coverage of query (309 bits)

Q9XCL6 glutamate-tRNA ligase (EC 6.1.1.17) from Pseudomonas aeruginosa (see paper)
    36% identity, 99% coverage of query (286 bits)

8vc5A / Q9XCL6 Crystal structure of glutamyl-tRNA synthetase glurs from pseudomonas aeruginosa (zinc bound)
    36% identity, 99% coverage of query (284 bits)

P9WFV9 glutamate-tRNA ligase (EC 6.1.1.17) from Mycobacterium tuberculosis (see paper)
    38% identity, 99% coverage of query (283 bits)

SYE_THET8 / P27000 Glutamate--tRNA ligase; Glutamyl-tRNA synthetase; GluRS; EC 6.1.1.17 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 2 papers)
2cuzA / P27000 Glutamyl-tRNA synthetase from thermus thermophilus in complex with l- glutamate (see paper)
    36% identity, 97% coverage of query (281 bits)

1g59A Glutamyl-tRNA synthetase complexed with tRNA(glu).
    36% identity, 97% coverage of query (281 bits)

2cv2A Glutamyl-tRNA synthetase from thermus thermophilus in complex with tRNA(glu) and an enzyme inhibitor, glu-ams
    36% identity, 97% coverage of query (281 bits)

2cv1A Glutamyl-tRNA synthetase from thermus thermophilus in complex with tRNA(glu), atp, and an analog of l-glutamate: a quaternary complex
    36% identity, 97% coverage of query (281 bits)

1n78A Crystal structure of thermus thermophilus glutamyl-tRNA synthetase complexed with tRNA(glu) and glutamol-amp.
    36% identity, 97% coverage of query (281 bits)

1j09A Crystal structure of thermus thermophilus glutamyl-tRNA synthetase complexed with atp and glu
    36% identity, 97% coverage of query (281 bits)

6brlA / A0A1T3HI54 Crystal structure of a glutamate tRNA ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid (see paper)
    31% identity, 99% coverage of query (274 bits)

SYEM_YEAST / P48525 Glutamate--tRNA ligase, mitochondrial; Glutamyl-tRNA synthetase; GluRS; EC 6.1.1.17 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
    31% identity, 99% coverage of query (236 bits)

Build an alignment

Build an alignment for WP_010960518.1 and 21 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory