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Searching for up to 100 curated homologs for WP_011320406.1 NCBI__GCF_000204075.1:WP_011320406.1 (377 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 3.A.1.4.6 / Q8YY08 NatC, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB) (see paper)
    98% identity, 100% coverage of query (704 bits)

TC 3.A.1.4.2 / P74455 NatC aka SLL0146, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE (see paper)
    56% identity, 99% coverage of query (377 bits)

Build an alignment

Build an alignment for WP_011320406.1 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

AZOBR_RS08240 L-proline and D-alanine ABC transporter, permease component 2 from Azospirillum brasilense Sp245
    27% identity, 96% coverage of query (108 bits)

PGA1_c12650 D-lactate transporter, permease component 1 from Phaeobacter inhibens BS107
    27% identity, 96% coverage of query (81.6 bits)

TC 3.A.1.4.7 / Q92TN2 ABC transporter, permease, component of The protocatechuate (3,4-dihydroxybenzoate) uptake porter, PcaMNVWX from Rhizobium meliloti (strain 1021)
    25% identity, 99% coverage of query (73.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory