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Searching for up to 100 curated homologs for WP_011382582.1 NCBI__GCF_000009985.1:WP_011382582.1 (352 a.a.)

Found high-coverage hits (≥70%) to 34 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Q9KNV2 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
    35% identity, 86% coverage of query (149 bits)

AROB_HELPY / P56081 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) (see paper)
    32% identity, 86% coverage of query (148 bits)

3okfA / Q9KNV2 2.5 angstrom resolution crystal structure of 3-dehydroquinate synthase (arob) from vibrio cholerae
    35% identity, 86% coverage of query (145 bits)

kanC / Q6L738 2-deoxy-scyllo-inosose synthase (EC 4.2.3.124) from Streptomyces kanamyceticus (see 2 papers)
DOIS_STRKN / Q6L738 2-deoxy-scyllo-inosose synthase; DOI synthase; DOIS; EC 4.2.3.124 from Streptomyces kanamyceticus (see paper)
kanA / CAE46939.1 2-deoxy-scyllo-inosose synthase from Streptomyces kanamyceticus (see paper)
    31% identity, 85% coverage of query (141 bits)

Q8U0A8 3-dehydroquinate synthase (EC 4.2.3.4) from Pyrococcus furiosus (see paper)
    33% identity, 87% coverage of query (140 bits)

Q3M4V2 3-dehydroquinate synthase (EC 4.2.3.4) from Trichormus variabilis (see paper)
    37% identity, 70% coverage of query (138 bits)

3zokA / U3KRF2 Structure of 3-dehydroquinate synthase from actinidia chinensis in complex with NAD (see paper)
    33% identity, 88% coverage of query (138 bits)

DHQS_ACTCC / U3KRF2 3-dehydroquinate synthase, chloroplastic; EC 4.2.3.4 from Actinidia chinensis var. chinensis (Chinese soft-hair kiwi) (see paper)
    33% identity, 88% coverage of query (137 bits)

AroB / b3389 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli K-12 substr. MG1655 (see 10 papers)
aroB / P07639 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli (strain K12) (see 8 papers)
AROB_ECOLI / P07639 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Escherichia coli (strain K12) (see paper)
P07639 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli (see paper)
    35% identity, 84% coverage of query (137 bits)

6llaB Crystal structure of providencia alcalifaciens 3-dehydroquinate synthase (dhqs) in complex with mg2+ and NAD (see paper)
    37% identity, 84% coverage of query (134 bits)

6lk2A Crystal structure of providencia alcalifaciens 3-dehydroquinate synthase (dhqs) in complex with mg2+, NAD and chlorogenic acid
    37% identity, 84% coverage of query (134 bits)

neoC / Q53U19 2-deoxy-scyllo-inosose synthase (EC 4.2.3.124) from Streptomyces fradiae (see 2 papers)
DOIS_STRFR / Q53U19 2-deoxy-scyllo-inosose synthase; DOI synthase; DOIS; EC 4.2.3.124 from Streptomyces fradiae (Streptomyces roseoflavus) (see paper)
    35% identity, 74% coverage of query (132 bits)

Q5NFS1 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
    32% identity, 80% coverage of query (131 bits)

5eksA / V5V8R5 Structure of 3-dehydroquinate synthase from acinetobacter baumannii in complex with NAD
    35% identity, 76% coverage of query (130 bits)

6c5cA / Q5AME2 Crystal structure of the 3-dehydroquinate synthase (dhqs) domain of aro1 from candida albicans sc5314 in complex with nadh (see paper)
    33% identity, 79% coverage of query (130 bits)

aroB / CAA05722.1 3-dehydroquinate synthetase from Neisseria gonorrhoeae (see paper)
    34% identity, 81% coverage of query (130 bits)

6hqvA / G0S061 Pentafunctional arom complex from chaetomium thermophilum (see paper)
    32% identity, 76% coverage of query (130 bits)

1xagA / Q6GGU4 Crystal structure of staphlyococcus aureus 3-dehydroquinate synthase (dhqs) in complex with zn2+, NAD+ and carbaphosphonate (see paper)
    30% identity, 91% coverage of query (130 bits)

ARO1 / P08566 pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see 3 papers)
ARO1_YEAST / P08566 Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
    31% identity, 78% coverage of query (129 bits)

Q6GGU4 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Staphylococcus aureus (strain MRSA252)
    31% identity, 85% coverage of query (129 bits)

DHQS_SOLLC / Q8RU74 3-dehydroquinate synthase, chloroplastic; EC 4.2.3.4 from Solanum lycopersicum (Tomato) (Lycopersicon esculentum) (see paper)
    33% identity, 88% coverage of query (128 bits)

rifG / G0FS62 aminodehydroquinate synthase from Amycolatopsis mediterranei (strain S699) (see 2 papers)
RIFG_AMYMS / G0FS62 Putative aminodehydroquinate synthase; aDHQS; EC 4.2.3.- from Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei) (see paper)
    33% identity, 71% coverage of query (125 bits)

4p53A / H2K887 Vala (2-epi-5-epi-valiolone synthase) from streptomyces hygroscopicus subsp. Jinggangensis 5008 with NAD+ and zn2+ bound (see paper)
    33% identity, 73% coverage of query (122 bits)

valA / H2K887 2-epi-5-epi-valiolone synthase (EC 4.2.3.152) from Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) (see 3 papers)
VALA_STRHJ / H2K887 2-epi-5-epi-valiolone synthase; EEVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.152 from Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) (see 2 papers)
H2K887 2-epi-5-epi-valiolone synthase (EC 4.2.3.152) from Streptomyces hygroscopicus (see paper)
valA / AAW88569.1 ValA from Streptomyces hygroscopicus subsp. jinggangensis (see paper)
valA / ABA41506.1 2-epi-5-epi-valiolone synthase from Streptomyces hygroscopicus subsp. jinggangensis (see paper)
    32% identity, 72% coverage of query (122 bits)

EVS_STIAD / Q08VU0 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Stigmatella aurantiaca (strain DW4/3-1) (see paper)
Q08VU0 2-epi-valiolone synthase (EC 4.2.3.155) from Stigmatella aurantiaca (see paper)
    35% identity, 74% coverage of query (122 bits)

Amir_2000 / C6WFL3 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / JCM 3225 / NBRC 14064 / NCIMB 13271 / NRRL B-12336 / IMRU 3971 / 101) (see paper)
EVS_ACTMD / C6WFL3 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / JCM 3225 / NBRC 14064 / NCIMB 13271 / NRRL B-12336 / IMRU 3971 / 101) (see paper)
C6WFL3 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum (see paper)
    33% identity, 90% coverage of query (114 bits)

P9WPX9 3-dehydroquinate synthase (EC 4.2.3.4) from Mycobacterium tuberculosis (see 3 papers)
    31% identity, 84% coverage of query (112 bits)

P9WPX9 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
    31% identity, 84% coverage of query (112 bits)

3qbeA / P9WPX9 Crystal structure of the 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis
    30% identity, 84% coverage of query (107 bits)

Build an alignment

Build an alignment for WP_011382582.1 and 29 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

btrC / Q9S5E2 2-deoxy-scyllo-inosose synthase (EC 4.2.3.124) from Niallia circulans (see 9 papers)
DOIS_NIACI / Q9S5E2 2-deoxy-scyllo-inosose synthase; DOI synthase; DOIS; EC 4.2.3.124 from Niallia circulans (Bacillus circulans) (see 5 papers)
Q9S5E2 2-deoxy-scyllo-inosose synthase (EC 4.2.3.124) from Niallia circulans (see 14 papers)
    27% identity, 82% coverage of query (105 bits)

2gruA / Q9S5E2 Crystal structure of 2-deoxy-scyllo-inosose synthase complexed with carbaglucose-6-phosphate, NAD+ and co2+ (see paper)
    27% identity, 82% coverage of query (105 bits)

2gruB Crystal structure of 2-deoxy-scyllo-inosose synthase complexed with carbaglucose-6-phosphate, NAD+ and co2+
    27% identity, 82% coverage of query (105 bits)

DOIS_MICEC / Q70KD0 2-deoxy-scyllo-inosose synthase; DOI synthase; DOIS; EC 4.2.3.124 from Micromonospora echinospora (Micromonospora purpurea) (see paper)
gtmA / CAE06511.1 2-deoxy-scyllo-inosose synthase from Micromonospora echinospora (see paper)
    30% identity, 76% coverage of query (88.6 bits)

eevs / E7EXW6 2-epi-5-epi-valiolone synthase (EC 4.2.3.152) from Danio rerio (see paper)
    27% identity, 75% coverage of query (83.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory