Searching for up to 100 curated homologs for WP_011382705.1 NCBI__GCF_000009985.1:WP_011382705.1 (278 a.a.)

Found high-coverage hits (≥70%) to 16 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

G2IQQ3 protocatechuate 4,5-dioxygenase (subunit 1/2) (EC 1.13.11.8) from Sphingobium sp. (see paper)
    44% identity, 99% coverage of query (254 bits)

ligB / P22636 protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) from Sphingobium sp. (strain NBRC 103272 / SYK-6) (see 2 papers)
ligB / BAB88743.1 beta subunit of protocatechuate 4,5-dioxygenase from Sphingomonas paucimobilis (see 5 papers)
    44% identity, 99% coverage of query (254 bits)

1b4uB / P22636 Protocatechuate 4,5-dioxygenase (ligab) in complex with protocatechuate (pca) (see paper)
    44% identity, 99% coverage of query (251 bits)

AAK73573.1 PmdB from Comamonas testosteroni (see paper)
    44% identity, 100% coverage of query (249 bits)

PmdB / Q8RNX9 protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni (see paper)
proOb / BAD04058.1 beta subunit of protocatechuate 4,5-dioxygenase from Pseudomonas straminea (see paper)
    44% identity, 100% coverage of query (249 bits)

pmdB / BAI50715.1 protocatechuate 4,5-dioxygenase beta subunit from Comamonas sp. E6 (see paper)
    44% identity, 100% coverage of query (248 bits)

desB / Q5NTE5 gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis (see paper)
G2IKE5 gallate dioxygenase (EC 1.13.11.57) from Sphingobium sp. SYK-6 (see paper)
Q5NTE5 gallate dioxygenase (EC 1.13.11.57) from Sphingomonas paucimobilis (see paper)
desB / BAD80871.1 gallate dioxygenase from Sphingomonas paucimobilis (see 2 papers)
    43% identity, 98% coverage of query (226 bits)

3wr9A / G2IKE5 Crystal structure of the anaerobic desb-gallate complex (see paper)
    42% identity, 98% coverage of query (224 bits)

3wkuA Crystal structure of the anaerobic desb-gallate complex
    42% identity, 98% coverage of query (218 bits)

carBb / Q8GI18 2'-aminobiphenyl-2,3-diol 1,2-dioxygenase Bb subunit (EC 1.13.11.39) from Pseudomonas resinovorans (see 2 papers)
carBb / BAC41547.1 catalytic subunit of meta cleavage enzyme from Pseudomonas resinovorans (see 9 papers)
    32% identity, 76% coverage of query (108 bits)

flnD1 / BAD51800.1 extradiol dioxygenase large subunit from Rhodococcus sp. DFA3 (see paper)
    31% identity, 90% coverage of query (100 bits)

bphC6 / BAD10908.1 2, 3-dihydroxybiphenyl 1, 2-dioxygenase from Rhodococcus rhodochrous (see paper)
    31% identity, 90% coverage of query (100 bits)

flnD1 / BAC75996.1 extradiol dioxygenase large subunit from Terrabacter sp. DBF63 (see paper)
    30% identity, 90% coverage of query (95.9 bits)

Build an alignment

Build an alignment for WP_011382705.1 and 13 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

cbzE2 / AAX50134.1 CbzE2 from Pseudomonas putida (see paper)
    27% identity, 93% coverage of query (78.6 bits)

MHPB_COMTE / Q9S157 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase; 3-carboxyethylcatechol 2,3-dioxygenase; EC 1.13.11.16 from Comamonas testosteroni (Pseudomonas testosteroni) (see paper)
    25% identity, 76% coverage of query (72.0 bits)

desZ / Q7WYU8 3-O-methylgallate 3,4-dioxygenase from Sphingomonas paucimobilis (see paper)
    26% identity, 75% coverage of query (67.4 bits)

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