Searching for up to 100 curated homologs for WP_011382978.1 NCBI__GCF_000009985.1:WP_011382978.1 (553 a.a.)

Found high-coverage hits (≥70%) to 21 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AZOBR_RS18550 ABC transporter for nitrate, ATPase component from Azospirillum brasilense Sp245
    74% identity, 99% coverage of query (805 bits)

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Build an alignment for WP_011382978.1 and 1 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

ETTA_ECOL6 / A0A0H2VFI8 Energy-dependent translational throttle protein EttA; Translational regulatory factor EttA; EC 3.6.1.- from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
    27% identity, 85% coverage of query (107 bits)

YjjK / b4391 energy-dependent translational throttle protein EttA from Escherichia coli K-12 substr. MG1655 (see 9 papers)
ETTA_ECOLI / P0A9W3 Energy-dependent translational throttle protein EttA; Translational regulatory factor EttA; EC 3.6.1.- from Escherichia coli (strain K12) (see 2 papers)
CH_004211 ABC transporter, ATP-binding protein YjiK from Escherichia coli K12 (see paper)
    27% identity, 85% coverage of query (107 bits)

3j5sD / P0A9W3 Etta binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamics (see paper)
    27% identity, 85% coverage of query (106 bits)

YcbH / b0949 ATP-binding protein Uup from Escherichia coli K-12 substr. MG1655 (see 17 papers)
UUP_ECOLI / P43672 ATP-binding protein Uup; EC 3.6.1.- from Escherichia coli (strain K12) (see 5 papers)
    25% identity, 83% coverage of query (93.6 bits)

1yqtA Rnase-l inhibitor
    25% identity, 88% coverage of query (90.1 bits)

3bk7A / Q9UZA4 Structure of the complete abce1/rnaase-l inhibitor protein from pyrococcus abysii (see paper)
    26% identity, 88% coverage of query (89.7 bits)

5yv5A Crystal structure of the complex of archaeal ribosomal stalk protein ap1 and archaeal ribosome recycling factor aabce1.
    25% identity, 88% coverage of query (89.0 bits)

ABCE1_DROME / Q9VSS1 Protein Pixie; ATP-binding cassette sub-family E member 1 from Drosophila melanogaster (Fruit fly) (see 5 papers)
    24% identity, 86% coverage of query (89.0 bits)

P63389 Probable ATP-binding protein YheS from Escherichia coli (strain K12)
    25% identity, 88% coverage of query (85.1 bits)

YHES_ECOL6 / A0A0H2VBH0 Probable ATP-binding protein YheS from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
    25% identity, 88% coverage of query (84.7 bits)

7o80Bz / G1SG72 7o80Bz (see paper)
    24% identity, 86% coverage of query (84.3 bits)

ABCE1_HUMAN / P61221 ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I; EC 3.6.5.- from Homo sapiens (Human) (see 8 papers)
ABCE1_MOUSE / P61222 ATP-binding cassette sub-family E member 1; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I; EC 3.6.5.- from Mus musculus (Mouse) (see paper)
    24% identity, 86% coverage of query (84.3 bits)

6yalk Mammalian 48s late-stage initiation complex with beta-globin mRNA
    24% identity, 86% coverage of query (84.0 bits)

RLI1_YEAST / Q03195 Translation initiation factor RLI1; ATP-binding cassette sub-family E member RLI1; RNase L inhibitor from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 6 papers)
4crmP / Q03195 Cryo-em of a pre-recycling complex with erf1 and abce1 (see paper)
    23% identity, 86% coverage of query (82.8 bits)

3j16B Models of ribosome-bound dom34p and rli1p and their ribosomal binding partners
    23% identity, 86% coverage of query (82.8 bits)

7p7q0 7p7q0 (see paper)
    21% identity, 86% coverage of query (82.4 bits)

ETTA_MYCTU / P9WQK3 Energy-dependent translational throttle protein EttA; Translational regulatory factor EttA; EC 3.6.1.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
    25% identity, 87% coverage of query (80.5 bits)

7mscx 70SIC in complex with MtbEttA at Pre_R0 state
    26% identity, 87% coverage of query (80.5 bits)

P0A9U3 Probable ATP-binding protein YbiT from Escherichia coli (strain K12)
    22% identity, 89% coverage of query (77.0 bits)

YbiT / b0820 putative ATP-binding protein YbiT from Escherichia coli K-12 substr. MG1655 (see 7 papers)
YBIT_ECOL6 / P0A9U4 Probable ATP-binding protein YbiT from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
ybiT / MB|P0A9U3 uncharacterized ABC transporter ATP-binding protein ybiT from Escherichia coli K12 (see 2 papers)
    22% identity, 89% coverage of query (77.0 bits)

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