Searching for up to 100 curated homologs for WP_011385258.1 NCBI__GCF_000009985.1:WP_011385258.1 (261 a.a.)
Found high-coverage hits (≥70%) to 32 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
F9VNL6 glyceraldehyde dehydrogenase (FAD-containing) (subunit 2/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii (see paper)
34% identity, 98% coverage of query (149 bits)
Q974U9 glyceraldehyde dehydrogenase (FAD-containing) (subunit 2/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii (see paper)
32% identity, 98% coverage of query (134 bits)
4zohB / Q974U9 Crystal structure of glyceraldehyde oxidoreductase (see paper)
32% identity, 98% coverage of query (132 bits)
cutB / Q4J6M6 aldehyde dehydrogenase β subunit (EC 1.2.99.8) from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see paper)
CUTB_SULAC / Q4J6M6 Glyceraldehyde dehydrogenase medium chain; Glyceraldehyde dehydrogenase subunit B; Glyceraldehyde dehydrogenase subunit beta; EC 1.2.99.8 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see paper)
Q4J6M6 glyceraldehyde dehydrogenase (FAD-containing) (subunit 2/3) (EC 1.2.99.8) from Sulfolobus acidocaldarius (see paper)
33% identity, 98% coverage of query (130 bits)
DCMM_HYDPS / P19914 Carbon monoxide dehydrogenase medium chain; CO dehydrogenase subunit M; CO-DH M; EC 1.2.5.3 from Hydrogenophaga pseudoflava (Pseudomonas carboxydoflava) (see paper)
P19914 aerobic carbon monoxide dehydrogenase (subunit 2/3) (EC 1.2.5.3) from Hydrogenophaga pseudoflava (see 2 papers)
34% identity, 98% coverage of query (124 bits)
CDHB_PSEU3 / D7REY4 Caffeine dehydrogenase subunit beta; Caffeine dehydrogenase medium subunit; EC 1.17.5.2 from Pseudomonas sp. (strain CBB1) (see paper)
31% identity, 97% coverage of query (124 bits)
SSO2636 / Q97VI7 glycolaldehyde oxidoreductase medium subunit from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (see paper)
33% identity, 100% coverage of query (124 bits)
DCMM_AFIC5 / P19920 Carbon monoxide dehydrogenase medium chain; CO dehydrogenase subunit M; CO-DH M; EC 1.2.5.3 from Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) (Oligotropha carboxidovorans) (see 3 papers)
P19920 aerobic carbon monoxide dehydrogenase (EC 1.2.5.3); anaerobic carbon-monoxide dehydrogenase (subunit 2/3) (EC 1.2.7.4) from Afipia carboxidovorans (see 3 papers)
33% identity, 98% coverage of query (123 bits)
1ffuC / P19914 Carbon monoxide dehydrogenase from hydrogenophaga pseudoflava which lacks the mo-pyranopterin moiety of the molybdenum cofactor (see paper)
35% identity, 98% coverage of query (123 bits)
1n5wC / P19920 Crystal structure of the cu,mo-co dehydrogenase (codh); oxidized form (see paper)
34% identity, 98% coverage of query (123 bits)
atcB / A0A127F985 1-testosterone hydratase/dehydrogenase β subunit (EC 1.17.99.11) from Steroidobacter denitrificans (see 2 papers)
A0A127F985 3-oxo-DELTA1-steroid hydratase/dehydrogenase (subunit 2/3) (EC 1.17.99.11) from Steroidobacter denitrificans (see paper)
34% identity, 97% coverage of query (118 bits)
7dqxE / O87681 Crystal structure of xanthine dehydrogenase family protein
34% identity, 97% coverage of query (110 bits)
kdhA / O87681 ketone dehydrogenase medium subunit (EC 1.5.99.14) from Paenarthrobacter nicotinovorans (see paper)
KDHA_PAENI / O87681 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha; Ketone dehydrogenase medium FAD subunit; EC 1.5.99.14 from Paenarthrobacter nicotinovorans (Arthrobacter nicotinovorans) (see paper)
AAK64248.1 kdhM from Paenarthrobacter nicotinovorans (see paper)
kdhM / CAC37486.2 ketone dehydrogenase medium subunit from Paenarthrobacter nicotinovorans (see paper)
33% identity, 97% coverage of query (109 bits)
ndhA / Q59127 NdhA (EC 1.5.99.4) from Paenarthrobacter nicotinovorans (see 2 papers)
Q59127 nicotine dehydrogenase (EC 1.5.99.4) from Paenarthrobacter nicotinovorans (see 2 papers)
AAK64243.1 ndhM from Paenarthrobacter nicotinovorans (see paper)
34% identity, 97% coverage of query (107 bits)
D5G1Y0 anaerobic carbon-monoxide dehydrogenase (subunit 2/3) (EC 1.2.7.4) from Mycobacterium sp. (see paper)
38% identity, 74% coverage of query (97.8 bits)
hbaD / G3XCQ8 4-hydroxybenzoyl-CoA reductase HbaD subunit (EC 1.1.7.1) from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) (see 7 papers)
31% identity, 79% coverage of query (74.7 bits)
Build an alignment for WP_011385258.1 and 16 homologs with ≥ 30% identity
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XdhB / b2867 putative xanthine dehydrogenase FAD-binding subunit XdhB (EC 1.17.1.4) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
xdhB / Q46800 putative xanthine dehydrogenase FAD-binding subunit XdhB (EC 1.17.1.4) from Escherichia coli (strain K12) (see 2 papers)
Q46800 xanthine dehydrogenase (subunit 1/2) (EC 1.17.1.4) from Escherichia coli (see paper)
28% identity, 98% coverage of query (72.4 bits)
PS417_20885 Xanthine dehydrogenase (EC 1.17.1.4) from Pseudomonas simiae WCS417
30% identity, 91% coverage of query (72.0 bits)
ndhF / Q0QLF4 nicotinate hydroxylase 33 kD subunit (EC 1.17.1.5) from Eubacterium barkeri (see paper)
NDFS_EUBBA / Q0QLF4 Nicotinate dehydrogenase FAD-subunit; NDH; Nicotinic acid hydroxylase FAD-subunit; NAH; EC 1.17.1.5 from Eubacterium barkeri (Clostridium barkeri) (see 3 papers)
27% identity, 99% coverage of query (71.6 bits)
3hrdG / Q0QLF4 Crystal structure of nicotinate dehydrogenase (see paper)
27% identity, 99% coverage of query (71.2 bits)
AO356_02560 Xanthine dehydrogenase (EC 1.17.1.4) from Pseudomonas fluorescens FW300-N2C3
30% identity, 84% coverage of query (69.7 bits)
hcrB / O33820 4-hydroxybenzoyl-CoA reductase β subunit (EC 1.1.7.1) from Thauera aromatica (see paper)
HCRB_THAAR / O33820 4-hydroxybenzoyl-CoA reductase subunit beta; 4-HBCR subunit beta; EC 1.1.7.1 from Thauera aromatica (see 2 papers)
hcrB / CAA05039.1 4-Hydroxybenzoyl-CoA reductase beta-subunit from Thauera aromatica (see paper)
27% identity, 97% coverage of query (64.7 bits)
1rm6B / O33820 Structure of 4-hydroxybenzoyl-coa reductase from thauera aromatica (see paper)
27% identity, 97% coverage of query (64.3 bits)
Dshi_2958 Xanthine dehydrogenase (EC 1.17.1.4) from Dinoroseobacter shibae DFL-12
30% identity, 81% coverage of query (63.9 bits)
5g5gB / P77324 Escherichia coli periplasmic aldehyde oxidase (see paper)
29% identity, 98% coverage of query (62.4 bits)
YagS / b0285 aldehyde dehydrogenase, FAD-binding subunit (EC 1.2.99.6) from Escherichia coli K-12 substr. MG1655 (see paper)
paoB / P77324 aldehyde dehydrogenase, FAD-binding Fe-S subunit (EC 1.2.99.6) from Escherichia coli (strain K12) (see 3 papers)
PAOB_ECOLI / P77324 Aldehyde oxidoreductase FAD-binding subunit PaoB; EC 1.2.99.6 from Escherichia coli (strain K12) (see 4 papers)
P77324 xanthine dehydrogenase (subunit 2/3) (EC 1.17.1.4) from Escherichia coli (see paper)
29% identity, 98% coverage of query (62.0 bits)
5y6qB / Q84IX9 Crystal structure of an aldehyde oxidase from methylobacillus sp. Ky4400 (see paper)
25% identity, 99% coverage of query (60.5 bits)
2w54A Crystal structure of xanthine dehydrogenase from rhodobacter capsulatus in complex with bound inhibitor pterin-6-aldehyde
31% identity, 81% coverage of query (60.1 bits)
1jroA / O54050 Crystal structure of xanthine dehydrogenase from rhodobacter capsulatus (see paper)
31% identity, 81% coverage of query (59.7 bits)
O54050 xanthine dehydrogenase (subunit 2/2) (EC 1.17.1.4); xanthine oxidase (EC 1.17.3.2) from Rhodobacter capsulatus (see 2 papers)
xdhA / CAA04469.1 xanthine dehydrogenase from Rhodobacter capsulatus (see paper)
31% identity, 81% coverage of query (59.7 bits)
hcrB / Q5P3F4 4-hydroxybenzoyl-CoA reductase, β subunit (EC 1.1.7.1) from Aromatoleum aromaticum (strain EbN1) (see 3 papers)
30% identity, 96% coverage of query (52.0 bits)
YgfM / b2880 putative oxidoreductase from Escherichia coli K-12 substr. MG1655 (see paper)
29% identity, 94% coverage of query (50.1 bits)
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Lawrence Berkeley National Laboratory