Searching for up to 100 curated homologs for WP_011650009.1 NCBI__GCF_000009265.1:WP_011650009.1 (330 a.a.)
Found high-coverage hits (≥70%) to 16 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
7x0rB / A3DFS3 Crystal structure of substrate binding protein lbp complexed wtih guanosine from clostridium thermocellum (see paper)
34% identity, 90% coverage of query (156 bits)
NUPN_BACSU / O05252 ABC transporter guanosine-binding protein NupN from Bacillus subtilis (strain 168) (see 2 papers)
35% identity, 88% coverage of query (155 bits)
TC 3.A.1.2.17 / D2BKA1 Basic membrane lipoprotein, component of General nucleoside uptake porter, NupABC/BmpA (transports all common nucleosides as well as 5-fluorocytidine, inosine, deoxyuridine and xanthosine) (Martinussen et al., 2010) (Most similar to 3.A.1.2.12). NupA is 506aas with two ABC (C) domains. NupB has 8 predicted TMSs, NupC has 9 or 10 predicted TMSs in a 4 + 1 (or 2) + 4 arrangement from Lactococcus lactis subsp. lactis (strain KF147) (see 2 papers)
33% identity, 97% coverage of query (151 bits)
BMPA_LACLM / A2RK47 ABC transporter nucleoside-binding protein BmpA from Lactococcus lactis subsp. cremoris (strain MG1363) (see paper)
32% identity, 97% coverage of query (146 bits)
2fqwA / P29724 Pnra from treponema pallidum as purified from e. Coli (bound to inosine) (see paper)
33% identity, 84% coverage of query (131 bits)
TMPC_TREPA / P29724 Membrane lipoprotein TmpC; Membrane protein C; 35 kDa antigen; Lipoprotein TpN35; Purine nucleoside receptor A; PnrA from Treponema pallidum (strain Nichols) (see paper)
TC 3.A.1.2.10 / P29724 TmpC aka Membrane protein C aka 35 kDa antigen aka Lipoprotein TpN35, component of The purine nucleoside permease (probably transports guanosine, adenosine, 2'-deoxyguanosine, inosine and xanthosine with decreasing affinity in this order) from Treponema pallidum (see 2 papers)
33% identity, 84% coverage of query (131 bits)
2fqyA Pnra from treponema pallidum complexed with adenosine.
33% identity, 84% coverage of query (131 bits)
2fqxA Pnra from treponema pallidum complexed with guanosine
33% identity, 84% coverage of query (131 bits)
6shuA / E4S1L1 Borrelia burgdorferi bmpd nucleoside binding protein bound to adenosine (see paper)
32% identity, 86% coverage of query (126 bits)
6yagA Crystal structure of pnra from s. Pneumoniae in complex with thymidine
32% identity, 89% coverage of query (126 bits)
6yabAAA Lipoprotein
32% identity, 89% coverage of query (126 bits)
6y9uA / A0A0H2UPF3 Crystal structure of pnra from s. Pneumoniae in complex with adenosine (see paper)
32% identity, 89% coverage of query (125 bits)
6ya3A Crystal structure of pnra from s. Pneumoniae in complex with guanosine
32% identity, 89% coverage of query (125 bits)
6ya4A Crystal structure of pnra from s. Pneumoniae in complex with cytidine
32% identity, 89% coverage of query (125 bits)
4pevA / Q9Y8P1 Crystal structure of abc transporter system solute-binding proteins from aeropyrum pernix k1
30% identity, 75% coverage of query (122 bits)
TC 3.A.1.2.12 / Q8DU36 RnsA, component of The (deoxy)ribonucleoside permease; probably takes up all deoxy- and ribonucleosides (cytidine, uridine, adenosine and toxic analogues, fluorocytidine and fluorouridine tested), but not ribose or nucleobases from Streptococcus mutans (see paper)
33% identity, 90% coverage of query (118 bits)
Build an alignment for WP_011650009.1 and 16 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory