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Searching for up to 100 curated homologs for WP_011653664.1 NCBI__GCF_000009265.1:WP_011653664.1 (198 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

DJ1D_ARATH / Q9M8R4 Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    59% identity, 93% coverage of query (226 bits)

DJ1E_ARATH / Q9ZV19 DJ-1 protein homolog E; AtDJ-1E; Protein YELLOW-LEAF-SPECIFIC GENE 5 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Q9ZV19 D-lactate dehydratase (EC 4.2.1.130) from Arabidopsis thaliana (see paper)
    43% identity, 89% coverage of query (141 bits)

Q9M1G8 D-lactate dehydratase (EC 4.2.1.130) from Arabidopsis thaliana (see paper)
    43% identity, 89% coverage of query (135 bits)

PH1704 / O59413 archaeal arginyl aminopeptidase monomer (EC 3.4.11.27) from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 3 papers)
DEGLY_PYRHO / O59413 Deglycase PH1704; Intracellular protease PH1704; EC 3.5.1.124; EC 3.4.22.- from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see paper)
6f2fA / O59413 Crystal structure of protease 1 from pyrococcus horikoshii co- cystallized in presence of 10 mm tb-xo4 and ammonium sulfate. (see paper)
    37% identity, 92% coverage of query (119 bits)

6f2fC Crystal structure of protease 1 from pyrococcus horikoshii co- cystallized in presence of 10 mm tb-xo4 and ammonium sulfate.
    37% identity, 92% coverage of query (119 bits)

DEGLY_PYRFU / Q51732 Deglycase PfpI; Intracellular protease I; EC 3.5.1.124; EC 3.4.22.- from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see 3 papers)
Q51732 protein deglycase (EC 3.5.1.124); D-lactate dehydratase (EC 4.2.1.130) from Pyrococcus furiosus (see paper)
    36% identity, 92% coverage of query (113 bits)

2vrnA / Q9RV31 The structure of the stress response protein dr1199 from deinococcus radiodurans: a member of the dj-1 superfamily (see paper)
    32% identity, 86% coverage of query (91.3 bits)

YhbO / b3153 protein/nucleic acid deglycase 2 (EC 3.5.1.124; EC 4.2.1.130) from Escherichia coli K-12 substr. MG1655 (see 14 papers)
yhbO / P45470 protein/nucleic acid deglycase 2 (EC 3.5.1.124; EC 4.2.1.130) from Escherichia coli (strain K12) (see 14 papers)
YHBO_ECOLI / P45470 Protein/nucleic acid deglycase 2; Maillard deglycase; EC 3.1.2.-; EC 3.5.1.-; EC 3.5.1.124 from Escherichia coli (strain K12) (see 6 papers)
P45470 protein deglycase (EC 3.5.1.124); D-lactate dehydratase (EC 4.2.1.130) from Escherichia coli (see 2 papers)
yhbO / RF|NP_417622 protein yhbO from Escherichia coli K12 (see 3 papers)
    31% identity, 94% coverage of query (88.2 bits)

YRAA_BACSU / O06006 Putative cysteine protease YraA; EC 3.2.-.- from Bacillus subtilis (strain 168) (see paper)
    30% identity, 93% coverage of query (87.0 bits)

GS18_BACSU / P80876 General stress protein 18; GSP18; EC 3.2.-.- from Bacillus subtilis (strain 168) (see paper)
    31% identity, 93% coverage of query (86.3 bits)

Build an alignment

Build an alignment for WP_011653664.1 and 10 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Additional hits (identity < 30%)

DJ1B_DROME / Q9VA37 Protein dj-1beta from Drosophila melanogaster (Fruit fly) (see 9 papers)
    25% identity, 83% coverage of query (47.4 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory