Searching for up to 100 curated homologs for WP_011778593.1 NCBI__GCF_000015305.1:WP_011778593.1 (118 a.a.)
Found high-coverage hits (≥70%) to 44 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
todB / A5W4F0 toluene dioxygenase ferredoxin subunit (EC 1.14.12.11) from Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1) (see paper)
33% identity, 89% coverage of query (68.2 bits)
1fqtA / P37332 Crystal structure of the rieske-type ferredoxin associated with biphenyl dioxygenase (see paper)
bphF / GB|ABE37056.1 biphenyl dioxygenase system ferredoxin component from Burkholderia xenovorans LB400 (see 4 papers)
37% identity, 88% coverage of query (67.4 bits)
bphF / AAC44529.1 biphenyl dioxygenase ferredoxin from Pandoraea pnomenusa (see paper)
36% identity, 88% coverage of query (66.6 bits)
CARAC_PSERE / Q8GI16 Ferredoxin CarAc; Carbazole 1,9a-dioxygenase, ferredoxin component; CARDO from Pseudomonas resinovorans (see 4 papers)
Q8GI16 carbazole 1,9a-dioxygenase (EC 1.14.12.22) from Pseudomonas resinovorans (see paper)
carAc / BAC41549.1 ferredoxin component of carbazole from Pseudomonas resinovorans (see 9 papers)
38% identity, 85% coverage of query (66.2 bits)
3dqyA / A5W4F0 Crystal structure of toluene 2,3-dioxygenase ferredoxin (see paper)
33% identity, 87% coverage of query (66.2 bits)
4nbbE / Q8GI16 Carbazole- and oxygen-bound oxygenase with ile262 replaced by val and ferredoxin complex of carbazole 1,9a-dioxygenase (see paper)
38% identity, 85% coverage of query (66.2 bits)
BPHA3_RHOJR / Q53124 Biphenyl 2,3-dioxygenase, ferredoxin component; Biphenyl 2,3-dioxygenase, electron transfer component BphA3; Biphenyl dioxygenase system, ferredoxin component; BDO, ferredoxin component from Rhodococcus jostii (strain RHA1) (see paper)
bphA3 / BAA06870.1 biphenyl dioxygenase from Rhodococcus jostii RHA1 (see paper)
32% identity, 90% coverage of query (65.9 bits)
bphA3 / A0A097SRF0 biphenyl 2,3-dioxygenase ferredoxin subunit (EC 1.14.12.18) from Cupriavidus sp. WS (see paper)
34% identity, 88% coverage of query (65.9 bits)
bedB / Q07947 benzene 1,2 dioxygenase ferredoxin subunit (EC 1.14.12.3) from Pseudomonas putida (see 3 papers)
bedB / AAA17760.1 BedB from Pseudomonas putida (see 3 papers)
31% identity, 89% coverage of query (65.1 bits)
cnbAb / F4Y9I4 nitroarene dioxygenase ferredoxin component (EC 1.14.12.23) from Stutzerimonas stutzeri (see 2 papers)
F4Y9I4 nitroarene dioxygenase (subunit 3/4) (EC 1.14.12.23) from Pseudomonas stutzeri ZWLR2-1 (see paper)
35% identity, 89% coverage of query (62.8 bits)
tecA3 / O24678 chlorobenzene dioxygenase terminal oxidase ferredoxin subunit (EC 1.14.12.26; EC 1.14.12.18; EC 1.14.12.12) from Cupriavidus sp. (strain PS12) (see 2 papers)
TECA3_CUPXP / O24678 Chlorobenzene dioxygenase, ferredoxin component from Cupriavidus sp. (strain PS12) (see 2 papers)
30% identity, 90% coverage of query (61.6 bits)
Build an alignment for WP_011778593.1 and 11 homologs with ≥ 30% identity
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tcbAc / Q52385 chlorobenzene dioxygenase, ferredoxin component (EC 1.14.12.26) from Pseudomonas sp. (see 2 papers)
Q52385 chlorobenzene dioxygenase (subunit 2/4) (EC 1.14.12.26) from Pseudomonas sp. P51 (see 2 papers)
29% identity, 90% coverage of query (60.5 bits)
NAGAB_RALSP / O52381 Naphthalene 1,2-dioxygenase/salicylate 5-hydroxylase systems, ferredoxin component; NDO/S5H systems ferredoxin component; Ferredoxin NagAb from Ralstonia sp. (see 2 papers)
32% identity, 85% coverage of query (58.2 bits)
bphAc / BAM76238.1 biphenyl 2,3-dioxygenase, ferredoxin component from Janibacter sp. TYM3221 (see paper)
28% identity, 88% coverage of query (58.2 bits)
dntAb / Q6QUY4 2,4-dinitrotoluene dioxygenase complex ferredoxin component (EC 1.14.12.24) from Burkholderia sp. DNT (see 3 papers)
M9PSS0 nitroarene dioxygenase (subunit 2/4) (EC 1.14.12.23) from Diaphorobacter sp. DS2 (see paper)
32% identity, 85% coverage of query (57.8 bits)
5bokA / M9PSS0 Ferredoxin component of 3-nitrotoluene dioxygenase from diaphorobacter sp. Strain ds2
32% identity, 85% coverage of query (57.8 bits)
bpdB / AAB07752.1 ferredoxin from Rhodococcus sp. M5 (see paper)
29% identity, 92% coverage of query (57.4 bits)
YfhW / b2540 putative 3-phenylpropionate/cinnamate dioxygenase ferredoxin subunit (EC 1.14.12.19) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
hcaC / P0ABW0 putative 3-phenylpropionate/cinnamate dioxygenase ferredoxin subunit (EC 1.14.12.19) from Escherichia coli (strain K12) (see 3 papers)
P0ABW0 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase (EC 3.7.1.14) from Escherichia coli (see paper)
hcaC / RF|NP_417035 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit from Escherichia coli K12 (see 5 papers)
31% identity, 86% coverage of query (57.0 bits)
XAMOC_XANP2 / Q9ZET5 Alkene monooxygenase system, ferredoxin component; Alkene monooxygenase 13.3 kDa subunit from Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) (see 3 papers)
31% identity, 87% coverage of query (57.0 bits)
nbzAb / Q8RTL5 nitroarene dioxygenase complex ferredoxin component (EC 1.14.12.23; EC 1.14.12.24; EC 1.14.12.12) from Comamonas sp. JS765 (see 2 papers)
Q8RTL5 nitroarene dioxygenase (subunit 3/4) (EC 1.14.12.23) from Comamonas sp. (see paper)
33% identity, 82% coverage of query (55.8 bits)
ndoA / P0A185 naphthalene 1,2-dioxygenase complex ferredoxin component (EC 1.14.12.12) from Pseudomonas putida (see paper)
NDOA_PSEPU / P0A185 Naphthalene 1,2-dioxygenase system, ferredoxin component from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 4 papers)
nahAb / AAA25905.1 naphthalene 1,2-dioxygenase ferredoxin component from Pseudomonas putida (see 3 papers)
29% identity, 86% coverage of query (55.8 bits)
2qpzA / P0A185 Naphthalene 1,2-dioxygenase rieske ferredoxin (see paper)
29% identity, 86% coverage of query (55.8 bits)
nahAb / BAE92155.1 ferredoxin component NahAb of naphthalene dioxygenase from Pseudomonas putida (see 2 papers)
nahAb / AAA25901.1 ferredoxin from Pseudomonas putida (see paper)
30% identity, 85% coverage of query (55.5 bits)
ntdAb / P95563 2-nitrotoluene dioxygenase complex ferredoxin component (EC 1.14.12.23) from Pseudomonas sp. (see 3 papers)
33% identity, 82% coverage of query (55.5 bits)
phnA3 / CAG17580.1 ferredoxin from Sphingomonas sp. CHY-1 (see paper)
34% identity, 70% coverage of query (55.5 bits)
picB1 / A0A1X9WE61 6-hydroxypicolinate 3-monooxygenase subunit 1 from Alcaligenes faecalis (see paper)
30% identity, 75% coverage of query (54.3 bits)
cmtAd / Q51978 p-cumate 2,3-dioxygenase system, ferredoxin component (EC 1.14.12.25) from Pseudomonas putida (see paper)
CMTAD_PSEPU / Q51978 p-cumate 2,3-dioxygenase system, ferredoxin component from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 3 papers)
Q51978 p-cumate 2,3-dioxygenase (subunit 1/4) (EC 1.14.12.25) from Pseudomonas putida (see paper)
cmtAd / AAB62289.1 p-cumate dioxygenase ferredoxin subunit from Pseudomonas putida (see 3 papers)
32% identity, 91% coverage of query (52.4 bits)
2e4pA / Q52440 Crystal structure of bpha3 (oxidized form) (see paper)
33% identity, 74% coverage of query (52.0 bits)
NVD1_CIOIN / F7J186 Cholesterol 7-desaturase nvd 1; Neverland 1; Nvd-Ci-1; EC 1.14.19.21 from Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis) (see paper)
F7J186 cholesterol 7-desaturase (EC 1.14.19.21) from Ciona intestinalis (see paper)
37% identity, 86% coverage of query (51.6 bits)
DNTAB_BURSR / Q45694 2,4-dinitrotoluene dioxygenase system, ferredoxin component from Burkholderia sp. (strain RASC) (see paper)
29% identity, 86% coverage of query (51.6 bits)
8hn2A / Q9F722 Selenomethionine-labelled soluble domain of rieske iron-sulfur protein from chlorobaculum tepidum (see paper)
31% identity, 83% coverage of query (50.8 bits)
3gceA / Q2HWH6 Ferredoxin of carbazole 1,9a-dioxygenase from nocardioides aromaticivorans ic177 (see paper)
31% identity, 82% coverage of query (50.1 bits)
Q2HWH6 carbazole 1,9a-dioxygenase (EC 1.14.12.22) from Nocardioides aromaticivorans (see paper)
31% identity, 82% coverage of query (49.7 bits)
NVD_XENLA / F7J184 Cholesterol 7-desaturase nvd; Protein neverland; Nvd protein; nvd-Xl; EC 1.14.19.21 from Xenopus laevis (African clawed frog) (see paper)
F7J184 cholesterol 7-desaturase (EC 1.14.19.21) from Xenopus laevis (see paper)
36% identity, 84% coverage of query (47.4 bits)
8jngA / A0A5J4YIW4 Methanesulfonate monooxygenase ferredoxin subunit of pbs-psii-psi-lhcs from porphyridium purpureum.
28% identity, 81% coverage of query (47.0 bits)
iphA / BAH70269.1 oxygenase component of isophthalate dioxygenase from Comamonas sp. E6 (see 2 papers)
34% identity, 80% coverage of query (46.6 bits)
QCRA_CORGL / Q79VE8 Cytochrome bc1 complex Rieske iron-sulfur subunit; Cytochrome bc1 reductase complex subunit QcrA; Menaquinol--cytochrome c reductase iron-sulfur subunit; Rieske iron-sulfur protein from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534) (see 2 papers)
32% identity, 70% coverage of query (46.2 bits)
7qhmA / Q79VE8 Cytochrome bcc-aa3 supercomplex (respiratory supercomplex iii2/iv2) from corynebacterium glutamicum (stigmatellin and azide bound) (see paper)
32% identity, 70% coverage of query (45.8 bits)
7qhmN Cytochrome bcc-aa3 supercomplex (respiratory supercomplex iii2/iv2) from corynebacterium glutamicum (stigmatellin and azide bound)
32% identity, 70% coverage of query (45.8 bits)
niiA nitrite reductase [NAD(P)H]; EC 1.7.1.4 from Emericella nidulans (see paper)
36% identity, 70% coverage of query (43.5 bits)
8ovdG Respiratory supercomplex (iii2-iv2) from mycobacterium smegmatis
35% identity, 70% coverage of query (43.1 bits)
8ovcG Respiratory supercomplex (iii2-iv2) from mycobacterium smegmatis
35% identity, 70% coverage of query (43.1 bits)
6hwhA Structure of a functional obligate respiratory supercomplex from mycobacterium smegmatis
35% identity, 70% coverage of query (43.1 bits)
6adqA / I7GD61 Respiratory complex ciii2civ2sod2 from mycobacterium smegmatis (see paper)
35% identity, 70% coverage of query (43.1 bits)
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Lawrence Berkeley National Laboratory