Searching for up to 100 curated homologs for WP_012331049.1 NCBI__GCF_000019365.1:WP_012331049.1 (348 a.a.)

Found high-coverage hits (≥70%) to 28 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

RuvB / b1860 Holliday junction branch migration complex subunit RuvB from Escherichia coli K-12 substr. MG1655 (see 5 papers)
ruvB / P0A812 Holliday junction branch migration complex subunit RuvB (EC 3.1.21.10) from Escherichia coli (strain K12) (see 11 papers)
RUVB_ECOLI / P0A812 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Escherichia coli (strain K12) (see 25 papers)
    64% identity, 91% coverage of query (409 bits)

RUVB_SALTY / P66755 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    64% identity, 91% coverage of query (409 bits)

RUVB_ECO27 / B7USN7 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Escherichia coli O127:H6 (strain E2348/69 / EPEC) (see paper)
    64% identity, 91% coverage of query (408 bits)

RUVB_PSEAE / Q51426 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    61% identity, 96% coverage of query (405 bits)

RUVB_BURCE / Q93LP2 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Burkholderia cepacia (Pseudomonas cepacia) (see paper)
    63% identity, 92% coverage of query (389 bits)

7x5bA / Q51426 Crystal structure of ruvb (see paper)
    62% identity, 90% coverage of query (384 bits)

7x7pM Cryoem structure of dsdna-ruvb-ruva domain3 complex
    62% identity, 90% coverage of query (383 bits)

RUVB_BACSU / O32055 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Bacillus subtilis (strain 168) (see paper)
    56% identity, 93% coverage of query (355 bits)

RUVB_MYCTU / P9WGW1 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
P9WGW1 crossover junction endodeoxyribonuclease (subunit 1/2) (EC 3.1.21.10) from Mycobacterium tuberculosis (see paper)
    55% identity, 95% coverage of query (346 bits)

RUVB_THEMA / Q56313 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see 2 papers)
RUVB / AAB03727.1 RuvB protein from Thermotoga maritima (see paper)
    52% identity, 93% coverage of query (335 bits)

RUVB_STRT2 / Q5M2B1 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) (see paper)
    51% identity, 90% coverage of query (331 bits)

7pblD / Q5M2B1 Ruvab branch migration motor complexed to the holliday junction - ruvb aaa+ state s1 [t2 dataset] (see paper)
    52% identity, 89% coverage of query (329 bits)

7pblB Ruvab branch migration motor complexed to the holliday junction - ruvb aaa+ state s1 [t2 dataset]
    52% identity, 89% coverage of query (329 bits)

7pblA Ruvab branch migration motor complexed to the holliday junction - ruvb aaa+ state s1 [t2 dataset]
    52% identity, 89% coverage of query (329 bits)

RUVB_THET8 / Q5SL87 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 6 papers)
ruvB / RF|YP_143672.1 holliday junction ATP-dependent DNA helicase ruvB; EC 3.6.1.- from Thermus thermophilus HB8 (see 2 papers)
    55% identity, 90% coverage of query (321 bits)

RUVB_THETH / Q56214 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Thermus thermophilus (see paper)
RUVB / AAB03726.2 RuvB Protein from Thermus thermophilus (see paper)
    55% identity, 90% coverage of query (320 bits)

1ixsB / Q5SL87 Structure of ruvb complexed with ruva domain iii (see paper)
    55% identity, 90% coverage of query (319 bits)

8efyA Structure of double homo-hexameric aaa+ atpase ruvb motors
    55% identity, 90% coverage of query (319 bits)

8efvA Structure of single homo-hexameric holliday junction atp-dependent DNA helicase ruvb motor
    55% identity, 90% coverage of query (319 bits)

1hqcA Structure of ruvb from thermus thermophilus hb8
    55% identity, 90% coverage of query (318 bits)

3pfiA / Q9PMT7 2.7 angstrom resolution crystal structure of a probable holliday junction DNA helicase (ruvb) from campylobacter jejuni subsp. Jejuni nctc 11168 in complex with adenosine-5'-diphosphate
    51% identity, 89% coverage of query (317 bits)

1in5A / Q56313 Thermogota maritima ruvb a156s mutant (see paper)
    50% identity, 89% coverage of query (305 bits)

RUVB_SYNY3 / Q57396 Holliday junction branch migration complex subunit RuvB; EC 3.6.4.- from Synechocystis sp. (strain PCC 6803 / Kazusa) (see paper)
    50% identity, 91% coverage of query (303 bits)

1j7kA Thermotoga maritima ruvb p216g mutant
    50% identity, 89% coverage of query (303 bits)

Build an alignment

Build an alignment for WP_012331049.1 and 24 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

7kslC Substrate-free human mitochondrial lonp1
    25% identity, 89% coverage of query (52.0 bits)

YB7A_SCHPO / O14325 Uncharacterized AAA domain-containing protein C16E9.10c from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    26% identity, 73% coverage of query (48.1 bits)

7p0mF Human mitochondrial lon protease with substrate in the atpase and protease domains
    23% identity, 89% coverage of query (45.1 bits)

7p09F / P36776 Human mitochondrial lon protease with substrate in the atpase domain
    23% identity, 89% coverage of query (45.1 bits)

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