Sites on a Tree

 

Searching for up to 100 curated homologs for WP_012708954.1 NCBI__GCF_000018545.1:WP_012708954.1 (162 a.a.)

Found high-coverage hits (≥70%) to 43 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

No hits had 30% identity

Change minimum %identity:

Additional hits (identity < 30%)

4husA / P26839 Crystal structure of streptogramin group a antibiotic acetyltransferase vata from staphylococcus aureus in complex with virginiamycin m1 (see paper)
    28% identity, 92% coverage of query (56.2 bits)

6x3cE Crystal structure of streptogramin a acetyltransferase vata from staphylococcus aureus in complex with streptogramin analog f1037 (47)
    28% identity, 92% coverage of query (56.2 bits)

4hurA Crystal structure of streptogramin group a antibiotic acetyltransferase vata from staphylococcus aureus in complex with acetyl coenzyme a
    28% identity, 92% coverage of query (56.2 bits)

6x3jA Crystal structure of streptogramin a acetyltransferase vata from staphylococcus aureus in complex with streptogramin analog f0224 (46)
    28% identity, 92% coverage of query (56.2 bits)

6x3cA Crystal structure of streptogramin a acetyltransferase vata from staphylococcus aureus in complex with streptogramin analog f1037 (47)
    28% identity, 92% coverage of query (56.2 bits)

6pubA / Q9KMN1 Crystal structure of the type b chloramphenicol acetyltransferase from vibrio cholerae in the complex with crystal violet
    29% identity, 93% coverage of query (55.1 bits)

6u9cA The 2.2 a crystal structure of the type b chloramphenicol acetyltransferase from vibrio cholerae in the complex with acetyl coa
    29% identity, 93% coverage of query (55.1 bits)

2xatA / P26841 Complex of the hexapeptide xenobiotic acetyltransferase with chloramphenicol and desulfo-coenzyme a (see paper)
    28% identity, 70% coverage of query (54.3 bits)

sat / AAN77593.1 streptogramin acetyl transferase from Yersinia enterocolitica (see paper)
    25% identity, 97% coverage of query (53.1 bits)

B2RGM6 UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase (EC 2.3.1.201) from Porphyromonas gingivalis (see paper)
    29% identity, 93% coverage of query (52.8 bits)

LacA / b0342 galactoside O-acetyltransferase (EC 2.3.1.18) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
lacA / P07464 galactoside O-acetyltransferase (EC 2.3.1.18) from Escherichia coli (strain K12) (see 19 papers)
THGA_ECOLI / P07464 Galactoside O-acetyltransferase; GAT; Acetyl-CoA:galactoside 6-O-acetyltransferase; Thiogalactoside acetyltransferase; Thiogalactoside transacetylase; EC 2.3.1.18 from Escherichia coli (strain K12) (see 5 papers)
P07464 galactoside O-acetyltransferase (EC 2.3.1.18) from Escherichia coli (see paper)
    29% identity, 71% coverage of query (52.8 bits)

Y3034_MYCTU / O53281 Probable acetyltransferase Rv3034c; Peroxisome homeostasis protein Rv3034c; EC 2.3.1.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
    29% identity, 72% coverage of query (52.8 bits)

1kruA / P07464 Galactoside acetyltransferase in complex with iptg and coenzyme a (see paper)
    30% identity, 70% coverage of query (52.8 bits)

1krvA Galactoside acetyltransferase in complex with coa and pnp-beta-gal
    30% identity, 70% coverage of query (52.8 bits)

1krrA Galactoside acetyltransferase in complex with acetyl-coenzyme a
    30% identity, 70% coverage of query (52.4 bits)

fdtC / Q6T1W7 dTDP-3-amino-3,6-dideoxy-α-D-galactopyranose 3-N-acetyltransferase (EC 2.3.1.197) from Aneurinibacillus thermoaerophilus (see 2 papers)
FDTC_ANETH / Q6T1W7 dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase; dTDP-D-Fucp3N acetylase; EC 2.3.1.197 from Aneurinibacillus thermoaerophilus (see paper)
Q6T1W7 dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase (EC 2.3.1.197) from Aneurinibacillus thermoaerophilus (see paper)
    30% identity, 82% coverage of query (51.2 bits)

8j40A / Q6Q627 Crystal structure of catb8 in complex with chloramphenicol (see paper)
    31% identity, 70% coverage of query (50.8 bits)

1khrA / P50870 Crystal structure of vat(d) in complex with virginiamycin and coenzyme a (see paper)
    26% identity, 70% coverage of query (50.8 bits)

3dhoA Structure of streptogramin acetyltransferase in complex with an inhibitor
    26% identity, 70% coverage of query (50.8 bits)

1mrlA Crystal structure of streptogramin a acetyltransferase with dalfopristin
    26% identity, 70% coverage of query (50.8 bits)

1kk4A Crystal structure of vat(d) in complex with acetyl-coa
    26% identity, 70% coverage of query (50.8 bits)

catB2 chloramphenicol O-acetyltransferase; EC 2.3.1.28 from Escherichia coli (see paper)
    32% identity, 71% coverage of query (50.4 bits)

P50870 Streptogramin A acetyltransferase; Virginiamycin acetyltransferase D; Vat(D); EC 2.3.1.- from Enterococcus faecium (Streptococcus faecium)
    26% identity, 70% coverage of query (50.4 bits)

catB3 / CAA08841.1 Chloramphenicol acetyltransferase from Salmonella enterica subsp. enterica serovar Typhimurium (see 3 papers)
    27% identity, 70% coverage of query (49.3 bits)

7aqqy / Q9C6B3 Cryo-em structure of arabidopsis thaliana complex-i (membrane core) (see paper)
    29% identity, 82% coverage of query (48.5 bits)

at1g47260 / Q9C6B3 NADH-ubiquinone oxidoreductase subunit (EC 7.1.1.2) from Arabidopsis thaliana (see paper)
GCA2_ARATH / Q9C6B3 Gamma carbonic anhydrase 2, mitochondrial; AtCA2; GAMMA CA2; Transcription factor APFI; EC 4.2.1.- from Arabidopsis thaliana (Mouse-ear cress) (see 8 papers)
Q9C6B3 carbonic anhydrase (EC 4.2.1.1) from Arabidopsis thaliana (see paper)
    28% identity, 84% coverage of query (48.5 bits)

8bpxy Cytochrome b-c1 complex subunit Rieske-1, mitochondrial
    28% identity, 84% coverage of query (48.5 bits)

8befy Cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci membrane core)
    28% identity, 84% coverage of query (48.5 bits)

7ar7y Cryo-em structure of arabidopsis thaliana complex-i (open conformation)
    29% identity, 82% coverage of query (48.5 bits)

8e73G2 / A0A1S3U544 8e73G2 (see paper)
    28% identity, 82% coverage of query (48.1 bits)

wbiO / A0A0A8J6G1 acetyl-CoA:α-L-Fuc-(1→2)-β-D-Gal-(1→3)-α-D-GalNAc-(1→3)-α-D-GalNAc-PP-Und 3/4-OIVacetyltransferase from Escherichia coli (see 2 papers)
wzxO127 / A0A0A8J6G1 Escherichia coli O:127 antigen repeat unit flippase from Escherichia coli (see 8 papers)
    25% identity, 99% coverage of query (48.1 bits)

GCA1_ARATH / Q9FWR5 Gamma carbonic anhydrase 1, mitochondrial; AtCA1; GAMMA CA1; EC 4.2.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Q9FWR5 carbonic anhydrase (EC 4.2.1.1) from Arabidopsis thaliana (see paper)
    28% identity, 82% coverage of query (47.4 bits)

7aqqz / Q9FWR5 Cryo-em structure of arabidopsis thaliana complex-i (membrane core) (see paper)
    28% identity, 82% coverage of query (47.0 bits)

7a23p Plant mitochondrial respiratory complex i
    28% identity, 82% coverage of query (47.0 bits)

fdtD / Q12KT8 bifunctional ketoisomerase / N-acetyltransferase FdtD subunit (EC 5.3.2.3; EC 2.3.1.197) from Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) (see paper)
    29% identity, 71% coverage of query (45.4 bits)

4mzuB Crystal structure of fdtd, a bifunctional ketoisomerase/n- acetyltransferase from shewanella denitrificans
    30% identity, 71% coverage of query (45.4 bits)

at5g66510 / Q94AU7 NADH-ubiquinone oxidoreductase subunit (EC 7.1.1.2) from Arabidopsis thaliana (see paper)
GCA3_ARATH / Q94AU7 Gamma carbonic anhydrase 3, mitochondrial; AtCA3; GAMMA CA3; EC 4.2.1.- from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
    29% identity, 72% coverage of query (45.1 bits)

3vbmE Crystal structure of the s84t mutant of antd, an n-acyltransferase from bacillus cereus in complex with dtdp and coenzyme a (see paper)
    26% identity, 72% coverage of query (43.9 bits)

4mzuF / Q12KT8 Crystal structure of fdtd, a bifunctional ketoisomerase/n- acetyltransferase from shewanella denitrificans (see paper)
    31% identity, 71% coverage of query (43.9 bits)

Q5ZY64 UDP-3-O-(3-hydroxyacyl)glucosamine N-acyltransferase (EC 2.3.1.191) from Legionella pneumophila (see paper)
    30% identity, 77% coverage of query (43.9 bits)

3vbkC Crystal structure of the s84a mutant of antd, an n-acyltransferase from bacillus cereus in complex with dtdp-4-amino-4,6-dideoxyglucose and coenzyme a
    26% identity, 72% coverage of query (43.9 bits)

3vbjA Crystal structure of antd, an n-acyltransferase from bacillus cereus in complex with dtdp and 3-hydroxybutyryl-coa
    26% identity, 72% coverage of query (42.7 bits)

3vbiA Crystal structure of antd, an n-acyltransferase from bacillus cereus in complex with dtdp-4-amino-4,6-dideoxyglucose and coenzyme a
    26% identity, 72% coverage of query (42.7 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory