Sites on a Tree

 

Searching for up to 100 curated homologs for WP_012853158.1 NCBI__GCF_000024385.1:WP_012853158.1 (120 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AROH_THETH / Q84FH6 Chorismate mutase AroH; EC 5.4.99.5 from Thermus thermophilus (see paper)
Q84FH6 chorismate mutase (EC 5.4.99.5) from Thermus thermophilus (see paper)
    53% identity, 97% coverage of query (115 bits)

1dbfA / P19080 Chorismate mutase from bacillus subtilis at 1.30 angstrom (see paper)
    47% identity, 99% coverage of query (112 bits)

AROH_BACSU / P19080 Chorismate mutase AroH; CM; EC 5.4.99.5 from Bacillus subtilis (strain 168) (see 5 papers)
    46% identity, 99% coverage of query (111 bits)

3zp7A Arg90cit chorismate mutase of bacillus subtilis in complex with chorismate and prephenate
    47% identity, 96% coverage of query (110 bits)

2chtA Crystal structures of the monofunctional chorismate mutase from bacillus subtilis and its complex with a transition state analog
    47% identity, 93% coverage of query (106 bits)

1comA The monofunctional chorismate mutase from bacillus subtilis: structure determination of chorismate mutase and its complexes with a transition state analog and prephenate, and implications on the mechanism of enzymatic reaction
    47% identity, 93% coverage of query (106 bits)

Build an alignment

Build an alignment for WP_012853158.1 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory