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Searching for up to 100 curated homologs for WP_013819451.1 NCBI__GCF_000214665.1:WP_013819451.1 (364 a.a.)

Found high-coverage hits (≥70%) to 58 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

A0R220 Threonine synthase; TS; EC 4.2.3.1 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)
    57% identity, 96% coverage of query (384 bits)

2zsjA / O66740 Crystal structure of threonine synthase from aquifex aeolicus vf5
    55% identity, 98% coverage of query (381 bits)

O66740 threonine synthase (EC 4.2.3.1) from Aquifex aeolicus (see paper)
    55% identity, 98% coverage of query (380 bits)

THRC_MYCTU / P9WG59 Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
P9WG59 threonine synthase (EC 4.2.3.1) from Mycobacterium tuberculosis (see 2 papers)
    59% identity, 93% coverage of query (375 bits)

2d1fA / P9WG59 Structure of mycobacterium tuberculosis threonine synthase (see paper)
    59% identity, 92% coverage of query (372 bits)

1uimA Crystal structure of threonine synthase from thermus thermophilus hb8, orthorhombic crystal form
    56% identity, 93% coverage of query (369 bits)

3aeyA Apo form of threonine synthase from thermus thermophilus hb8
    56% identity, 93% coverage of query (369 bits)

P83823 threonine synthase (EC 4.2.3.1) from Thermus thermophilus (see paper)
Q5SL02 threonine synthase (EC 4.2.3.1) from Thermus thermophilus (see 2 papers)
3aexA / Q5SL02 Catalytic intermediate analogue of threonine synthase from thermus thermophilus hb8 (see paper)
    56% identity, 93% coverage of query (368 bits)

1v7cA Crystal structure of threonine synthase from thermus thermophilus hb8 in complex with a substrate analogue
    56% identity, 93% coverage of query (368 bits)

6nmxA / A8HUA2 Threonine synthase from bacillus subtilis atcc 6633 with plp and appa (see paper)
    54% identity, 96% coverage of query (367 bits)

6cgqB Threonine synthase from bacillus subtilis atcc 6633 with plp and plp- ala
    54% identity, 96% coverage of query (367 bits)

thrC / CAA82669.1 threonine synthase from Bacillus sp. (see paper)
    57% identity, 91% coverage of query (366 bits)

6cgqA Threonine synthase from bacillus subtilis atcc 6633 with plp and plp- ala
    53% identity, 96% coverage of query (351 bits)

THRC_METAC / Q8TQD4 Threonine synthase; TS; EC 4.2.3.1 from Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) (see paper)
GB|AAM05023.1 threonine synthase; EC 4.2.3.1 from Methanosarcina acetivorans C2A (see paper)
    46% identity, 96% coverage of query (303 bits)

THRC1_ARATH / Q9S7B5 Threonine synthase 1, chloroplastic; Protein METHIONINE OVER-ACCUMULATOR 2; EC 4.2.3.1 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    33% identity, 93% coverage of query (167 bits)

THRC2_ARATH / Q9SSP5 Threonine synthase 2, chloroplastic; EC 4.2.3.1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
    32% identity, 93% coverage of query (167 bits)

2c2bA Crystallographic structure of arabidopsis thaliana threonine synthase complexed with pyridoxal phosphate and s-adenosylmethionine
    32% identity, 96% coverage of query (167 bits)

2c2gA / Q9S7B5 Crystal structure of threonine synthase from arabidopsis thaliana in complex with its cofactor pyridoxal phosphate (see paper)
    31% identity, 96% coverage of query (155 bits)

DvMF_1945 threonine synthase (EC 4.2.3.1) from Desulfovibrio vulgaris Miyazaki F
    32% identity, 89% coverage of query (118 bits)

Build an alignment

Build an alignment for WP_013819451.1 and 19 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

Q54HH2 D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum (see paper)
    26% identity, 76% coverage of query (67.0 bits)

Q8VBT2 L-serine dehydratase/L-threonine deaminase; SDH; L-serine deaminase; L-threonine dehydratase; TDH; EC 4.3.1.17; EC 4.3.1.19 from Mus musculus (Mouse)
    24% identity, 82% coverage of query (64.7 bits)

Cbs / P32232 cystathionine β-synthase subunit (EC 4.2.1.22) from Rattus norvegicus (see 2 papers)
CBS_RAT / P32232 Cystathionine beta-synthase; Beta-thionase; Hemoprotein H-450; Serine sulfhydrase; EC 4.2.1.22 from Rattus norvegicus (Rat) (see 3 papers)
    26% identity, 81% coverage of query (63.9 bits)

4pcuA Crystal structure of delta516-525 e201s human cystathionine beta- synthase with adomet
    24% identity, 81% coverage of query (63.5 bits)

LTHAD_YEAST / P36007 L-threo-3-hydroxyaspartate ammonia-lyase; L-threo-3-hydroxyaspartate dehydratase; EC 4.3.1.16 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
    26% identity, 71% coverage of query (63.2 bits)

SRR / Q9GZT4 Serine racemase (EC 5.1.1.10) from Homo sapiens (see 4 papers)
SRR_HUMAN / Q9GZT4 Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Homo sapiens (Human) (see 8 papers)
    25% identity, 82% coverage of query (62.8 bits)

A0QX60 threonine ammonia-lyase (EC 4.3.1.19) from Mycolicibacterium smegmatis (see paper)
    26% identity, 84% coverage of query (62.8 bits)

7nbcAAA / Q9GZT4 structure of human serine racemase in complex with DSiP fragment Z2856434779, XChem fragment screen (see paper)
    25% identity, 82% coverage of query (62.8 bits)

7nbgAAA structure of human serine racemase in complex with DSiP fragment Z52314092, XChem fragment screen
    25% identity, 82% coverage of query (62.8 bits)

7nbfAAA structure of human serine racemase in complex with DSiP fragment Z126932614, XChem fragment screen
    25% identity, 82% coverage of query (62.8 bits)

7nbdAAA structure of human serine racemase in complex with DSiP fragment Z235449082, XChem fragment screen
    25% identity, 82% coverage of query (62.8 bits)

7nbcCCC structure of human serine racemase in complex with DSiP fragment Z2856434779, XChem fragment screen
    25% identity, 82% coverage of query (62.8 bits)

7nbhAAA structure of human serine racemase in complex with DSiP fragment Z26781964, XChem fragment screen
    25% identity, 82% coverage of query (62.4 bits)

8s5hA / P35520 Full-length human cystathionine beta-synthase with c-terminal 6xhis- tag, basal state, helical reconstruction (see paper)
    24% identity, 81% coverage of query (62.0 bits)

7nbgDDD structure of human serine racemase in complex with DSiP fragment Z52314092, XChem fragment screen
    25% identity, 82% coverage of query (62.0 bits)

CS1 / A2EI82 O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis (strain ATCC PRA-98 / G3) (see paper)
    25% identity, 70% coverage of query (61.6 bits)

7qgtB Crystal structure of human cystathionine beta-synthase (delta516-525) in complex with aoaa.
    24% identity, 81% coverage of query (61.6 bits)

3l6bA X-ray crystal structure of human serine racemase in complex with malonate a potent inhibitor
    25% identity, 82% coverage of query (61.6 bits)

CBS / P35520 cystathionine β-synthase monomer (EC 4.2.1.22) from Homo sapiens (see 12 papers)
CBS_HUMAN / P35520 Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens (Human) (see 43 papers)
P35520 cystathionine beta-synthase (EC 4.2.1.22) from Homo sapiens (see 18 papers)
    24% identity, 81% coverage of query (61.2 bits)

cysK / P56067 cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori (strain ATCC 700392 / 26695) (see 2 papers)
6ahiB / P56067 Crystal structure of o-acetylserine dependent cystathionine beta- synthase from helicobacter pylori. (see paper)
    24% identity, 84% coverage of query (60.5 bits)

sr / A5HUN0 serine racemase/D-serine ammonia-lyase (EC 5.1.1.10) from Hordeum vulgare (see paper)
A5HUN0 serine racemase (EC 5.1.1.18) from Hordeum vulgare (see paper)
    25% identity, 76% coverage of query (60.1 bits)

1jbqA Structure of human cystathionine beta-synthase: a unique pyridoxal 5'- phosphate dependent hemeprotein
    24% identity, 81% coverage of query (59.7 bits)

BHCB_PARDP / A1B8Z2 beta-hydroxyaspartate dehydratase; EC 4.2.1.- from Paracoccus denitrificans (strain Pd 1222) (see paper)
    25% identity, 82% coverage of query (59.3 bits)

cysK / CAA90597.1 cysteine synthase from Flavobacterium sp (see paper)
    25% identity, 73% coverage of query (59.3 bits)

ThrC / b0004 threonine synthase (EC 4.2.3.1) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
thrC / P00934 threonine synthase (EC 4.2.3.1) from Escherichia coli (strain K12) (see 3 papers)
THRC_ECOLI / P00934 Threonine synthase; TS; EC 4.2.3.1 from Escherichia coli (strain K12) (see paper)
P00934 threonine synthase (EC 4.2.3.1) from Escherichia coli (see paper)
1vb3A / P00934 Crystal structure of threonine synthase from escherichia coli
thrC / GB|BAB96581.1 threonine synthase; EC 4.2.3.1 from Escherichia coli (see paper)
    28% identity, 73% coverage of query (58.9 bits)

6zspAAA serine racemase bound to atp and malonate.
    24% identity, 82% coverage of query (58.5 bits)

ortB / C1FW07 AKP thiolase β subunit (EC 2.3.1.263) from Unknown prokaryotic organism (see 2 papers)
ORTB_UNKP / C1FW07 2-amino-4-ketopentanoate thiolase beta subunit; AKP thiolase; AKPT; EC 2.3.1.263 from Unknown prokaryotic organism (see paper)
C1FW07 2-amino-4-oxopentanoate thiolase (subunit 2/2) (EC 2.3.1.263) from Acetoanaerobium sticklandii (see paper)
    23% identity, 76% coverage of query (57.8 bits)

CA265_RS15860 threonine deaminase (EC 4.3.1.19) from Pedobacter sp. GW460-11-11-14-LB5
    26% identity, 77% coverage of query (57.0 bits)

CBS / A0A563XPB1 cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus (see 7 papers)
    25% identity, 80% coverage of query (57.0 bits)

2bhtA / P16703 Crystal structure of o-acetylserine sulfhydrylase b (see paper)
    23% identity, 76% coverage of query (57.0 bits)

L0N5C4 threo-3-hydroxy-L-aspartate ammonia-lyase (EC 4.3.1.16) from Pseudomonas sp. N99 (see paper)
    26% identity, 82% coverage of query (56.6 bits)

CBS2_CAEEL / Q9N4K2 Putative cystathionine beta-synthase cbs-2; EC 4.2.1.22 from Caenorhabditis elegans (see 2 papers)
    23% identity, 88% coverage of query (56.2 bits)

F7ZG00 serine racemase (EC 5.1.1.18) from Roseobacter litoralis (see paper)
    24% identity, 82% coverage of query (55.8 bits)

1pwhA / P09367 Rat liver l-serine dehydratase- complex with pyridoxyl-(o-methyl- serine)-5-monophosphate (see paper)
    23% identity, 82% coverage of query (55.5 bits)

A0A0F6AQU1 cysteine synthase (EC 2.5.1.47) from Brucella abortus (see paper)
    26% identity, 78% coverage of query (54.3 bits)

SDS / P20132 L-serine dehydratase (EC 4.3.1.19; EC 4.3.1.17) from Homo sapiens (see 2 papers)
SDHL_HUMAN / P20132 L-serine dehydratase/L-threonine deaminase; SDH; Hepatic serine dehydratase; hSDH; L-serine deaminase; L-threonine dehydratase; TDH; EC 4.3.1.17; EC 4.3.1.19 from Homo sapiens (Human) (see 5 papers)
P20132 L-serine ammonia-lyase (EC 4.3.1.17) from Homo sapiens (see 3 papers)
    24% identity, 77% coverage of query (53.1 bits)

6xo2A / T1KF23 Structural characterization of beta cyanoalanine synthase from tetranychus urticae (two-spotted spider mite) (see paper)
    23% identity, 83% coverage of query (52.4 bits)

1p5jA / P20132 Crystal structure analysis of human serine dehydratase (see paper)
    24% identity, 77% coverage of query (50.1 bits)

5d86A Staphyloferrin b precursor biosynthetic enzyme sbna y152f variant
    25% identity, 85% coverage of query (45.1 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory