Sites on a Tree

 

Searching for up to 100 curated homologs for WP_013835171.1 NCBI__GCF_000214825.1:WP_013835171.1 (357 a.a.)

Found high-coverage hits (≥70%) to 100 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

4iwhA / Q2T7H6 Crystal structure of a 3-isopropylmalate dehydrogenase from burkholderia pseudomallei
    67% identity, 99% coverage of query (488 bits)

4xxvA Crystal structure of 3-isopropylmalate dehydrogenase from burkholderia thailandensis in complex with NAD
    67% identity, 99% coverage of query (488 bits)

1a05A / Q56268 Crystal structure of the complex of 3-isopropylmalate dehydrogenase from thiobacillus ferrooxidans with 3-isopropylmalate (see paper)
    64% identity, 99% coverage of query (459 bits)

LEU3_ACIFR / Q56268 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans) (see 2 papers)
Q56268 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Acidithiobacillus ferrooxidans (see paper)
    64% identity, 99% coverage of query (459 bits)

LEU32_ARATH / P93832 3-isopropylmalate dehydrogenase 2, chloroplastic; 3-IPM-DH 2; AtIMDH2; AtIMDH3; IMDH 2; Beta-IPM dehydrogenase 2; Isopropylmalate dehydrogenase 2; AtIMD2; EC 1.1.1.85 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
P93832 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana (see 4 papers)
    63% identity, 99% coverage of query (454 bits)

5j32A / P93832 Isopropylmalate dehydrogenase in complex with isopropylmalate (see paper)
    63% identity, 99% coverage of query (454 bits)

5j33A Isopropylmalate dehydrogenase in complex with NAD+
    63% identity, 99% coverage of query (453 bits)

P29102 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Brassica napus (see paper)
    62% identity, 99% coverage of query (446 bits)

LEU33_ARATH / Q9SA14 3-isopropylmalate dehydrogenase 3, chloroplastic; 3-IPM-DH 3; AtIMDH2; AtIMDH3; IMDH 3; Beta-IPM dehydrogenase 3; Isopropylmalate dehydrogenase 3; AtIMD3; EC 1.1.1.85 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
Q9SA14 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana (see 3 papers)
    62% identity, 99% coverage of query (441 bits)

IMDH3 / Q9FMT1 isopropylmalate dehydrogenase 3 (EC 1.1.1.85) from Arabidopsis thaliana (see paper)
LEU31_ARATH / Q9FMT1 3-isopropylmalate dehydrogenase 1, chloroplastic; 3-IPM-DH 1; AtIMDH1; IMDH 1; Beta-IPM dehydrogenase 1; Isopropylmalate dehydrogenase 1; AtIMD1; Methylthioalkylmalate dehydrogenase 1; EC 1.1.1.85 from Arabidopsis thaliana (Mouse-ear cress) (see 5 papers)
Q9FMT1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana (see 4 papers)
    61% identity, 99% coverage of query (438 bits)

P96197 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Azotobacter vinelandii (see paper)
    62% identity, 100% coverage of query (416 bits)

P24404 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Agrobacterium tumefaciens (see paper)
    55% identity, 99% coverage of query (404 bits)

Q00412 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arthrospira platensis (see paper)
    60% identity, 97% coverage of query (399 bits)

LEU3_SALTY / P37412 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 3 papers)
P37412 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
1cnzA / P37412 3-isopropylmalate dehydrogenase (ipmdh) from salmonella typhimurium (see paper)
    54% identity, 98% coverage of query (393 bits)

P31958 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Clostridium pasteurianum (see paper)
leuB / AAC41394.1 isopropylmalate dehydrogenase from Clostridium pasteurianum (see paper)
    57% identity, 99% coverage of query (389 bits)

LeuB / b0073 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
leuB / P30125 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli (strain K12) (see 12 papers)
LEU3_ECOLI / P30125 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Escherichia coli (strain K12) (see 2 papers)
P30125 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli (see 2 papers)
leuB / BAA04537.1 3-isopropylmalate dehydrogenase from Escherichia coli (see paper)
    53% identity, 98% coverage of query (386 bits)

LEU3_HEYCO / P12010 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Heyndrickxia coagulans (Weizmannia coagulans) (see paper)
    55% identity, 100% coverage of query (377 bits)

P43860 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Haemophilus influenzae (see paper)
    53% identity, 99% coverage of query (376 bits)

6xxyA / P43860 Crystal structure of haemophilus influenzae 3-isopropylmalate dehydrogenase in complex with o-isobutenyl oxalylhydroxamate. (see paper)
    53% identity, 99% coverage of query (376 bits)

leuB / P24015 β-isopropylmalate dehydrogenase subunit (EC 1.1.1.85) from Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) (see 2 papers)
P24015 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Leptospira interrogans (see paper)
leuB / AAA72088.1 3-isopropylmalate dehydrogenase from Leptospira borgpetersenii (see paper)
    55% identity, 98% coverage of query (374 bits)

D2YZL2 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella benthica (see 3 papers)
    52% identity, 100% coverage of query (369 bits)

3vmkA / D2YZL2 3-isopropylmalate dehydrogenase from shewanella benthica db21 mt-2 (see paper)
    52% identity, 100% coverage of query (367 bits)

Q8E9N3 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella oneidensis (see 4 papers)
    51% identity, 99% coverage of query (361 bits)

3vkzA / Q8E9N3 3-isopropylmalate dehydrogenase from shewanella oneidensis mr-1 at atmospheric pressure (see paper)
    51% identity, 99% coverage of query (359 bits)

P24098 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus aquaticus (see paper)
    53% identity, 91% coverage of query (347 bits)

P61494 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus (see 2 papers)
    54% identity, 91% coverage of query (344 bits)

2y42D / Q5SIY4 Structure of isopropylmalate dehydrogenase from thermus thermophilus - complex with nadh and mn (see paper)
    54% identity, 91% coverage of query (343 bits)

LEU3_THET8 / Q5SIY4 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 4 papers)
Q5SIY4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus (see 12 papers)
    54% identity, 91% coverage of query (343 bits)

P61495 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus (see paper)
    54% identity, 91% coverage of query (343 bits)

2ztwA Structure of 3-isopropylmalate dehydrogenase in complex with the inhibitor and NAD+
    54% identity, 91% coverage of query (343 bits)

2y41A Structure of isopropylmalate dehydrogenase from thermus thermophilus - complex with ipm and mn
    54% identity, 91% coverage of query (343 bits)

P08791 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Cyberlindnera jadinii (see paper)
    48% identity, 99% coverage of query (308 bits)

S2J6B8 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mucor circinelloides (see paper)
    49% identity, 99% coverage of query (303 bits)

P34733 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Ogataea angusta (see paper)
    48% identity, 100% coverage of query (302 bits)

LEU2 / P04173 3-isopropylmalate dehydrogenase monomer (EC 1.1.1.85) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see 4 papers)
    46% identity, 99% coverage of query (300 bits)

leu2 / CAD32688.1 3-isopropylmalate dehydrogenase from Blastobotrys adeninivorans (see paper)
    48% identity, 100% coverage of query (295 bits)

Q6PY58 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Kazachstania humilis (see paper)
    46% identity, 99% coverage of query (293 bits)

P54354 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Bacteroides fragilis (see paper)
leuB / BAA08117.1 beta-isopropylmalate dehydrogenase from Bacteroides fragilis (see paper)
    44% identity, 99% coverage of query (291 bits)

P87256 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Aspergillus niger (see paper)
    47% identity, 99% coverage of query (290 bits)

P07139 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Candida maltosa (see paper)
    45% identity, 99% coverage of query (288 bits)

Q9Y897 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Zymoseptoria tritici (see paper)
    44% identity, 100% coverage of query (286 bits)

LEU2 3-isopropylmalate dehydrogenase; EC 1.1.1.85 from Candida albicans (see 2 papers)
    45% identity, 99% coverage of query (286 bits)

O60027 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Eremothecium gossypii (see paper)
    47% identity, 98% coverage of query (285 bits)

O94114 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Scheffersomyces stipitis (see paper)
    45% identity, 99% coverage of query (284 bits)

leu1 / RF|NP_595804.2 3-isopropylmalate dehydrogenase Leu1; EC 1.1.1.85 from Schizosaccharomyces pombe (see 2 papers)
    44% identity, 99% coverage of query (282 bits)

P18869 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; Beta-IPM dehydrogenase; EC 1.1.1.85 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
    44% identity, 99% coverage of query (282 bits)

GLOI_GLAL2 / S3DB74 3-isopropylmalate dehydrogenase gloI; L-homotyrosine biosynthesis sub-cluster protein gloI; Pneumocandin biosynthesis cluster protein I; EC 1.1.1.85 from Glarea lozoyensis (strain ATCC 20868 / MF5171) (see 5 papers)
    45% identity, 99% coverage of query (278 bits)

AMT6_ALTAL / C9K7B7 3-isopropylmalate dehydrogenase AMT6; AM-toxin biosynthesis protein 6; EC 1.1.1.85 from Alternaria alternata (Alternaria rot fungus) (Torula alternata) (see 3 papers)
    46% identity, 99% coverage of query (272 bits)

Q01987 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from [Candida] boidinii (see paper)
    45% identity, 100% coverage of query (271 bits)

HtyC / K0E689 3-(4-hydroxybenzyl)-malate dehydrogenase from Aspergillus rugulosus (see paper)
HTYC_ASPRU / K0E689 Isopropyl malate dehydrogenase htyC; L-homotyrosine biosynthetic cluster protein C; EC 1.1.1.85 from Aspergillus rugulosus (Emericella rugulosa) (see paper)
    43% identity, 100% coverage of query (243 bits)

hphB / B2J8P1 2-benzyl-3-hydroxybutanedioate dehydrogenase (EC 1.1.1.85) from Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (see paper)
    40% identity, 100% coverage of query (237 bits)

hicdh / Q5SIJ1 homoisocitrate dehydrogenase subunit (EC 1.1.1.87) from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
HICDH_THET8 / Q5SIJ1 Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
HICDH_THET2 / Q72IW9 Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27) (see 4 papers)
Q5SIJ1 homoisocitrate dehydrogenase (EC 1.1.1.87) from Thermus thermophilus (see paper)
    39% identity, 100% coverage of query (205 bits)

3asjA / Q5SIJ1 Crystal structure of homoisocitrate dehydrogenase in complex with a designed inhibitor (see paper)
    39% identity, 99% coverage of query (204 bits)

4yb4A Crystal structure of homoisocitrate dehydrogenase from thermus thermophilus in complex with homoisocitrate, magnesium ion (ii) and nadh
    39% identity, 99% coverage of query (204 bits)

3asjB Crystal structure of homoisocitrate dehydrogenase in complex with a designed inhibitor
    39% identity, 99% coverage of query (204 bits)

MJ0720 / Q58130 3-isopropylmalate dehydrogenase subunit (EC 1.1.1.85) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see 2 papers)
LEU3_METJA / Q58130 3-isopropylmalate/3-methylmalate dehydrogenase; 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; IPMDH; Beta-IPM dehydrogenase; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.85; EC 1.1.1.n5; EC 1.1.1.83 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
    37% identity, 99% coverage of query (202 bits)

aksF / Q58991 NAD-dependent threo-isocitrate dehydrogenase (EC 1.1.1.87) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see paper)
AKSF_METJA / Q58991 Homoisocitrate dehydrogenase; HICDH; Homo(2)-isocitrate/homo(3)-isocitrate dehydrogenase; Isohomocitrate dehydrogenase; IHDH; NAD-dependent threo-isohomocitrate dehydrogenase; EC 1.1.1.87; EC 1.1.1.- from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 2 papers)
Q58991 methanogen homoaconitase (EC 4.2.1.114) from Methanocaldococcus jannaschii (see paper)
    37% identity, 98% coverage of query (201 bits)

P94929 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mycobacterium tuberculosis variant bovis (see paper)
    37% identity, 99% coverage of query (196 bits)

2g4oA / P9WKK9 Anomalous substructure of 3-isopropylmalate dehydrogenase (see paper)
    37% identity, 99% coverage of query (196 bits)

LEU3_MYCTU / P9WKK9 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
    37% identity, 99% coverage of query (196 bits)

hdh / BAD06515.1 homoisocitrate dehydrogenase, partial from Deinococcus radiodurans (see paper)
    38% identity, 99% coverage of query (196 bits)

LEU3_SULTO / P50455 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; Beta-IPM dehydrogenase; EC 1.1.1.85 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii) (see paper)
P50455 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfurisphaera tokodaii (see 3 papers)
    39% identity, 90% coverage of query (192 bits)

4y1pB / Q4JB37 Crystal structure of 3-isopropylmalate dehydrogenase (saci_0600) from sulfolobus acidocaldarius complex with 3-isopropylmalate and mg2+ (see paper)
    41% identity, 85% coverage of query (192 bits)

Q4JB37 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfolobus acidocaldarius (see paper)
    41% identity, 85% coverage of query (192 bits)

6lkyA / Q602J2 Crystal structure of isocitrate dehydrogenase from methylococcus capsulatus
    36% identity, 99% coverage of query (187 bits)

6m3sB / A0A0H2XBX7 Dimeric isocitrate dehydrogenase from xanthomonas campestris pv. Campestris 8004
    37% identity, 96% coverage of query (180 bits)

EBL86_19295 / A0A3G6WGL6 L-tartrate dehydrogenase/D-malate dehydrogenase (decarboxylating)/meso-tartrate decarboxylase monomer (EC 1.1.1.83; EC 1.1.1.93) from Cereibacter sphaeroides (see 2 papers)
    35% identity, 99% coverage of query (172 bits)

YeaU / b1800 D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli K-12 substr. MG1655 (see 7 papers)
dmlA / P76251 D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli (strain K12) (see 5 papers)
DMLA_ECOLI / P76251 D-malate dehydrogenase [decarboxylating]; D-malate degradation protein A; D-malate oxidase; EC 1.1.1.83 from Escherichia coli (strain K12) (see 2 papers)
P76251 D-malate dehydrogenase (decarboxylating) (EC 1.1.1.83) from Escherichia coli (see paper)
yeaU / RF|NP_416314 D-malate dehydrogenase [decarboxylating] from Escherichia coli K12 (see 3 papers)
    32% identity, 99% coverage of query (170 bits)

ecm3 / Q0X0C1 (2S,3R)-2-[(2-aminophenyl)amino]-3-carboxy-3-hydroxypropanoate dehydrogenase from Streptomyces lasalocidi (see 2 papers)
    37% identity, 87% coverage of query (169 bits)

3ty3A / O14104 Crystal structure of homoisocitrate dehydrogenase from schizosaccharomyces pombe bound to glycyl-glycyl-glycine (see paper)
    34% identity, 98% coverage of query (163 bits)

LYS12_SCHPO / O14104 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    34% identity, 98% coverage of query (163 bits)

Q5JFV8 isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Thermococcus kodakarensis (see paper)
    36% identity, 85% coverage of query (163 bits)

5hn4A / Q5JFV8 Crystal structure of beta-decarboxylating dehydrogenase (tk0280) from thermococcus kodakarensis complexed with mn and homoisocitrate (see paper)
    36% identity, 85% coverage of query (162 bits)

5hn6A Crystal structure of beta-decarboxylating dehydrogenase (tk0280) from thermococcus kodakarensis complexed with mn and 3-isopropylmalate
    36% identity, 85% coverage of query (162 bits)

2d1cA / P33197 Crystal structure of tt0538 protein from thermus thermophilus hb8
    33% identity, 99% coverage of query (161 bits)

3flkA / Q51945 Crystal structure of tartrate dehydrogenase from pseudomonas putida in complex with nadh, oxalate and metal ion (see paper)
    33% identity, 99% coverage of query (161 bits)

P33197 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermus thermophilus (see 2 papers)
icd / RF|YP_144801.1 isocitrate dehydrogenase (NADP(+)); EC 1.1.1.42 from Thermus thermophilus HB8 (see 2 papers)
    33% identity, 99% coverage of query (161 bits)

LYS12_YEAST / P40495 Homoisocitrate dehydrogenase, mitochondrial; HIcDH; EC 1.1.1.87 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 8 papers)
P40495 homoisocitrate dehydrogenase (EC 1.1.1.87) from Saccharomyces cerevisiae (see 2 papers)
    34% identity, 98% coverage of query (160 bits)

HICDH_PYRHO / O59394 Isocitrate/homoisocitrate dehydrogenase; HICDH; Beta-decarboxylating dehydrogenase; EC 1.1.1.286 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see paper)
    33% identity, 99% coverage of query (159 bits)

LEU3_HALVD / D4GYE8 3-isopropylmalate dehydrogenase; EC 1.1.1.85 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
    36% identity, 94% coverage of query (159 bits)

lysB putative homoisocitrate dehydrogenase from Emericella nidulans (see paper)
    34% identity, 92% coverage of query (158 bits)

6kdyA Crystal structure of the alpha bata heterodimer of human idh3 in complex with NAD.
    33% identity, 92% coverage of query (155 bits)

6kdeA / P50213 Crystal structure of the alpha beta heterodimer of human idh3 in complex with ca(2+) (see paper)
    33% identity, 92% coverage of query (154 bits)

IDH3A / P50213 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286) from Homo sapiens (see 2 papers)
IDH3A_HUMAN / P50213 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Homo sapiens (Human) (see 5 papers)
P50213 isocitrate dehydrogenase (NAD+) (subunit 2/2) (EC 1.1.1.41) from Homo sapiens (see paper)
    32% identity, 92% coverage of query (154 bits)

U05986.1 / Q51945 tartrate dehydrogenase subunit (EC 1.1.1.83; EC 1.1.1.93) from Pseudomonas putida (see 7 papers)
TTUC_PSEPU / Q51945 Tartrate dehydrogenase/decarboxylase; TDH; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.93; EC 4.1.1.73; EC 1.1.1.83 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see paper)
    32% identity, 99% coverage of query (154 bits)

IDH3A_PIG / P56471 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Sus scrofa (Pig) (see paper)
    33% identity, 92% coverage of query (154 bits)

IDH3A_BOVIN / P41563 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitrate dehydrogenase subunits 3/4; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Bos taurus (Bovine) (see paper)
    33% identity, 92% coverage of query (154 bits)

6l59A Crystal structure of the alpha gamma heterodimer of human idh3 in complex with cit, mg and atp binding at allosteric site and mg, atp binding at active site.
    32% identity, 92% coverage of query (154 bits)

5yvtA Crystal structure of the alpha gamma heterodimer of human idh3 in complex with mg(2+) and nadh
    33% identity, 92% coverage of query (154 bits)

8grdA Crystal structure of a constitutively active mutant of the alpha beta heterodimer of human idh3 in complex with adp and mg
    33% identity, 92% coverage of query (154 bits)

5greA Crystal structure of the alpha gamma heterodimer of human idh3 in complex with mg(2+), citrate and adp
    33% identity, 92% coverage of query (153 bits)

IDH3A_MOUSE / Q9D6R2 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Mus musculus (Mouse) (see paper)
Q9D6R2 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Mus musculus (see paper)
    32% identity, 92% coverage of query (153 bits)

2iv0A / O29610 Thermal stability of isocitrate dehydrogenase from archaeoglobus fulgidus studied by crystal structure analysis and engineering of chimers (see paper)
    34% identity, 97% coverage of query (153 bits)

3blwA Yeast isocitrate dehydrogenase with citrate and amp bound in the regulatory subunits
    31% identity, 92% coverage of query (132 bits)

3blvC / P28834 Yeast isocitrate dehydrogenase with citrate bound in the regulatory subunits (see paper)
    31% identity, 92% coverage of query (132 bits)

Build an alignment

Build an alignment for WP_013835171.1 and 95 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

2e5mA / Q96YK6 Crystal structure of isocitrate dehydrogenase from sulfolobus tokodaii strain 7 (see paper)
    29% identity, 98% coverage of query (127 bits)

3blwF / P28241 Yeast isocitrate dehydrogenase with citrate and amp bound in the regulatory subunits (see paper)
    30% identity, 99% coverage of query (123 bits)

1tyoA / Q9YE81 Isocitrate dehydrogenase from the hyperthermophile aeropyrum pernix in complex with etheno-NADP (see paper)
    30% identity, 98% coverage of query (121 bits)

1xkdA Ternary complex of isocitrate dehydrogenase from the hyperthermophile aeropyrum pernix
    30% identity, 98% coverage of query (119 bits)

1isoA Isocitrate dehydrogenase: structure of an engineered NADP+--> NAD+ specificity-reversal mutant
    28% identity, 98% coverage of query (112 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory