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Searching for up to 100 curated homologs for WP_016557073.1 NCBI__GCF_000298315.2:WP_016557073.1 (314 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 2.A.80.1.4 / S5XTE7 Citrate uptake transporter, substrate binding protein, component of Pmf-dependent citrate uptake porter, TctABC from Corynebacterium glutamicum MB001
    38% identity, 93% coverage of query (212 bits)

Dshi_3123 Tricarboxylate transport protein TctC from Dinoroseobacter shibae DFL-12
    33% identity, 89% coverage of query (162 bits)

HP15_2661 Citrate uptake transporter, substrate-binding component TctC from Marinobacter adhaerens HP15
    35% identity, 92% coverage of query (142 bits)

Build an alignment

Build an alignment for WP_016557073.1 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

TC 2.A.80.1.1 / Q9FA46 TctC aka STM2786, component of The tricarboxylate transporter, TctABC from Salmonella enterica (see paper)
    29% identity, 100% coverage of query (113 bits)

8hkbA / A0A0K8P8D2 Tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d (see paper)
    28% identity, 76% coverage of query (80.9 bits)

7ndsA / A0A5N7XFM8 Crystal structure of tphc in a closed conformation (see paper)
    26% identity, 74% coverage of query (60.5 bits)

TC 2.A.80.1.2 / Q5D0X7 Terephthalate permease, component of Terephthalate (TPA) aromatic acid uptake transport system, TpiBA/TphC from Comamonas testosteroni
    26% identity, 74% coverage of query (60.1 bits)

7ndrD Crystal structure of tphc in an open conformation
    26% identity, 74% coverage of query (60.1 bits)

tphCII / BAE47084.1 periplasmic terephthalate binding receptor from Comamonas sp. E6 (see paper)
    26% identity, 74% coverage of query (59.7 bits)

5oeiA / Q6N193 R. Palustris rpa4515 with oxoadipate (see paper)
    24% identity, 74% coverage of query (53.9 bits)

5okuA R. Palustris rpa4515 with adipate
    24% identity, 74% coverage of query (53.9 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory