Searching for up to 100 curated homologs for WP_017618222.1 NCBI__GCF_002263495.1:WP_017618222.1 (369 a.a.)

Found high-coverage hits (≥70%) to 25 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 3.A.1.2.24 / O50503 Solute-binding protein, component of XylFGH downstream of characterized transcriptional regulator, ROK7B7 (Sco6008); XylF (Sco6009); XylG (Sco6010); XylH (Sco6011)) from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
    53% identity, 87% coverage of query (334 bits)

TC 3.A.1.2.26 / A6LW10 D-xylose ABC transporter, periplasmic substrate-binding protein, component of Xylose transporter, XylFGH (XylF (R), 359 aas; XylG (C), 525 aas; XylH (M), 389 aas from Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
    37% identity, 85% coverage of query (188 bits)

XylT / b3566 xylose ABC transporter periplasmic binding protein (EC 7.5.2.13; EC 7.5.2.10) from Escherichia coli K-12 substr. MG1655 (see 8 papers)
xylF / P37387 xylose ABC transporter periplasmic binding protein (EC 7.5.2.13) from Escherichia coli (strain K12) (see 6 papers)
TC 3.A.1.2.4 / P37387 XylF aka XYLT aka B3566, component of Xylose porter from Escherichia coli (see 5 papers)
xylF / GB|AAC76590.1 D-xylose ABC transporter, periplasmic D-xylose-binding protein from Escherichia coli K12 (see 7 papers)
    36% identity, 85% coverage of query (179 bits)

3ma0A / P37387 Closed liganded crystal structure of xylose binding protein from escherichia coli (see paper)
    36% identity, 85% coverage of query (179 bits)

4ywhA / A6VLM7 Crystal structure of an abc transporter solute binding protein (ipr025997) from actinobacillus succinogenes 130z (asuc_0499, target efi-511068) with bound d-xylose
    36% identity, 85% coverage of query (169 bits)

TC 3.A.1.2.5 / P25548 CVE1 aka ChvE aka ATU2348 aka AGR_C_4267, component of Multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter from Agrobacterium tumefaciens (see 4 papers)
    33% identity, 86% coverage of query (162 bits)

3urmA / P25548 Crystal structure of the periplasmic sugar binding protein chve (see paper)
    33% identity, 85% coverage of query (160 bits)

3uugA Crystal structure of the periplasmic sugar binding protein chve
    33% identity, 85% coverage of query (160 bits)

PGA1_262p00430 glucose transporter, periplasmic substrate-binding component from Phaeobacter inhibens BS107
    37% identity, 76% coverage of query (157 bits)

Dshi_2000 xylitol ABC transporter, periplasmic substrate-binding protein from Dinoroseobacter shibae DFL-12
    37% identity, 76% coverage of query (155 bits)

SBPA_AZOBR / P54083 Multiple sugar-binding periplasmic protein SbpA; Sugar-binding protein A from Azospirillum brasilense (see paper)
    32% identity, 92% coverage of query (151 bits)

4wwhA / A0QT42 Crystal structure of an abc transporter solute binding protein (ipr025997) from mycobacterium smegmatis (msmeg_1704, target efi- 510967) with bound d-galactose
    33% identity, 83% coverage of query (150 bits)

chvE / CAC67776.1 sugar-binding protein from Brucella suis (see paper)
    31% identity, 87% coverage of query (143 bits)

4ys6A / A9KQP6 Crystal structure of an abc transporter solute binding protein (ipr025997) from clostridium phytofermentans (cphy_1585, target efi- 511156) with bound beta-d-glucose
    30% identity, 85% coverage of query (140 bits)

TC 3.A.1.2.22 / Q8G3R1 Probable sugar binding protein of ABC transporter for pentoses, component of ABC sugar transporter that plays a role in the probiotic benefits through acetate production from Bifidobacterium longum (strain NCC 2705)
    30% identity, 93% coverage of query (130 bits)

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Build an alignment for WP_017618222.1 and 15 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

4rxuA / A9WDY0 Crystal structure of carbohydrate transporter solute binding protein caur_1924 from chloroflexus aurantiacus, target efi-511158, in complex with d-glucose
    29% identity, 83% coverage of query (96.7 bits)

PS417_11885 Inositol transport system sugar-binding protein from Pseudomonas simiae WCS417
    29% identity, 78% coverage of query (74.7 bits)

THPA_MYCS2 / A0QYB5 D-threitol-binding protein from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
    28% identity, 79% coverage of query (73.9 bits)

4z0nA / D1AWX5 Crystal structure of a periplasmic solute binding protein (ipr025997) from streptobacillus moniliformis dsm-12112 (smon_0317, target efi- 511281) with bound d-galactose
    27% identity, 71% coverage of query (70.9 bits)

PS417_12055 xylitol ABC transporter, substrate-binding component from Pseudomonas simiae WCS417
    27% identity, 72% coverage of query (67.8 bits)

7e7mC / Q8E283 Crystal structure analysis of the streptococcus agalactiae ribose binding protein rbsb
    26% identity, 77% coverage of query (62.4 bits)

TC 3.A.1.2.21 / B8H228 Inositol ABC transporter, periplasmic inositol-binding protein IbpA, component of The myoinositol (high affinity)/ D-ribose (low affinity) transporter IatP/IatA/IbpA. The structure of IbpA with myoinositol bound has been solved from Caulobacter crescentus (strain NA1000 / CB15N)
    26% identity, 78% coverage of query (58.5 bits)

4irxA / A0A0H3C834 Crystal structure of caulobacter myo-inositol binding protein bound to myo-inositol (see paper)
    26% identity, 78% coverage of query (58.2 bits)

2fn8A / Q9X053 Thermotoga maritima ribose binding protein ribose bound form (see paper)
    27% identity, 70% coverage of query (57.8 bits)

TC 3.A.1.2.19 / Q9X053 Periplasmic binding protein/LacI transcriptional regulator, component of D-ribose porter (Nanavati et al., 2006). Induced by ribose from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
    27% identity, 70% coverage of query (57.8 bits)

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