Sites on a Tree

 

Searching for up to 100 curated homologs for WP_022671106.1 NCBI__GCF_000420385.1:WP_022671106.1 (95 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

gatC / O06492 glutamyl-tRNAGln amidotransferase subunit C (EC 6.3.5.7) from Bacillus subtilis (strain 168) (see paper)
    34% identity, 97% coverage of query (68.2 bits)

Build an alignment

Build an alignment for WP_022671106.1 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

GATC_STRP6 / Q5XAC6 Glutamyl-tRNA(Gln) amidotransferase subunit C; Glu-ADT subunit C; EC 6.3.5.- from Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
    27% identity, 98% coverage of query (50.8 bits)

gatC / Q9RUV6 glutamyl-tRNAGln amidotransferase subunit C (EC 6.3.5.7; EC 6.3.5.6) from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) (see paper)
    24% identity, 99% coverage of query (45.4 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory